RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 DONSONQ9NYP3 566 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PPP1R1BQ9UD71 204 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-249ENST00000564606 PGAP2Q9UHJ9 254 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 BCAP29Q9UHQ4 241 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 DNPEPQ9ULA0 475 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 SNCAIPQ9Y6H5 919 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ADGRA2Q96PE1 1338 aa7.99□□□□□ -1.13
ATXN3-249ENST00000564606 ADAMTSL1Q8N6G6 1762 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 XPOTO43592 962 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 HBP1O60381 514 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 LPXNO60711 386 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 DNAJC6O75061 913 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 HAUS5O94927 633 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 STBD1O95210 358 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 VNN1O95497 513 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 SNRPAP09012 282 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 HOXC6P09630 235 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 MCF2P10911 925 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 MYL4P12829 197 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 PTPRAP18433 802 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 KDELR1P24390 212 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 SCNN1AP37088 669 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 NR2C2P49116 596 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ARFIP2P53365 341 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 EIF3EP60228 445 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 PSMC1P62191 440 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 CXCL9Q07325 125 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ILF2Q12905 390 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 NAA25Q14CX7 972 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 TRIP13Q15645 432 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 DALRD3Q5D0E6 543 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF484Q5JVG2 852 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 STXBP5Q5T5C0 1151 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 FAM91A1Q658Y4 838 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF449Q6P9G9 518 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 DARS2Q6PI48 645 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 TSHZ1Q6ZSZ6 1077 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 CYS1Q717R9 158 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ILDR2Q71H61 639 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 PDZD4Q76G19 769 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 SLC26A11Q86WA9 606 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 RIOX2Q8IUF8 465 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 VPS52Q8N1B4 723 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 UBR7Q8N806 425 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 SLC4A11Q8NBS3 891 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 TEKT4Q8WW24 435 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF516Q92618 1163 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF75CPQ92670 426 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 PRCCQ92733 491 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 APOPT1Q96IL0 206 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 NSL1Q96IY1 281 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ACO2Q99798 780 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 CNPY3Q9BT09 278 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 CCDC28BQ9BUN5 200 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 KIFC3Q9BVG8 833 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 TSSK1BQ9BXA7 367 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 SLC4A5Q9BY07 1137 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 BCAS3Q9H6U6 928 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 RNPEPL1Q9HAU8 725 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 XAB2Q9HCS7 855 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 CYLDQ9NQC7 956 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF277Q9NRM2 450 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ABCF3Q9NUQ8 709 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 MKS1Q9NXB0 559 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 HESX1Q9UBX0 185 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 RABGEF1Q9UJ41 708 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 MID2Q9UJV3 735 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 CPSF3Q9UKF6 684 aaKnown RBP7.98□□□□□ -1.13
ATXN3-249ENST00000564606 ANGPTL2Q9UKU9 493 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 TNFSF13BQ9Y275 285 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 STK38LQ9Y2H1 464 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 IVNS1ABPQ9Y6Y0 642 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 CNTNAP2Q9UHC6 1331 aa7.98□□□□□ -1.13
ATXN3-249ENST00000564606 GOLGA8QA0A0J9YX86 632 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 GOLGA8OA6NCC3 632 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 HACD1B0YJ81 288 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 GOLGA8NF8WBI6 632 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 COPEO14579 308 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 BIRC5O15392 142 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 TYROBPO43914 113 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 CST8O60676 142 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 SLURP2P0DP57 97 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 KRT4P19013 534 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 GPD1P21695 349 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 RXRBP28702 533 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 HSPA1LP34931 641 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 GARSP41250 739 aaKnown RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 GABRB2P47870 512 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 SERPINB4P48594 390 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ALDH5A1P51649 535 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 ZNF143P52747 638 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 TAS2R40P59535 323 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 RBP5P82980 135 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 TFAMQ00059 246 aaKnown RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 KRT81Q14533 505 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 E2F5Q15329 346 aa7.97□□□□□ -1.13
ATXN3-249ENST00000564606 TARBP2Q15633 366 aaKnown RBP7.97□□□□□ -1.13
ATXN3-249ENST00000564606 TAZQ16635 292 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms