RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ACOT1Q86TX2 421 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 FAM35AQ86V20 835 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 ARL14EPQ8N8R7 260 aaPredicted RBP21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 TTC16Q8NEE8 873 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 SMARCE1Q969G3 411 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 MSANTD3Q96H12 275 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 CEP295NLQ96MC4 621 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 MED10Q9BTT4 135 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 TTLL2Q9BWV7 592 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 C8orf33Q9H7E9 229 aaPredicted RBP21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 APOBEC3GQ9HC16 384 aaKnown RBP21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 GKN1Q9NS71 199 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 MYO15AQ9UKN7 3530 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 NDST1P52848 882 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 MLLT6P55198 1093 aaPredicted RBP21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 NOP14P78316 857 aaKnown RBP21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 IFRD2Q12894 506 aaPredicted RBP21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 MTAPQ13126 283 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 ZNF268Q14587 947 aaPredicted RBP21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 WDR44Q5JSH3 913 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 SPATA20Q8TB22 786 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 NKD2Q969F2 451 aaPredicted RBP21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 TNIP3Q96KP6 325 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 TIGD1Q96MW7 591 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 FAM83CQ9BQN1 747 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 CHRDQ9H2X0 955 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 LMAN1LQ9HAT1 526 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 HPS4Q9NQG7 708 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 GCNT4Q9P109 453 aa21.24■□□□□ 0.99
SHCBP1-203ENST00000564272 HELZP42694 1942 aaKnown RBP21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 USP17L7P0C7H9 530 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 CHRNB1P11230 501 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 CCDC130P13994 396 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 PMS1P54277 932 aaKnown RBP21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 CSTF1Q05048 431 aaKnown RBP21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 ENPEPQ07075 957 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 USP4Q13107 963 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 ZNF77Q15935 545 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 ITPRIPL2Q3MIP1 535 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 COBLL1Q53SF7 1204 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 PAQR9Q6ZVX9 377 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 RALGPS2Q86X27 583 aaPredicted RBP21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 IMPG2Q9BZV3 1241 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 EBF3Q9H4W6 596 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 TMEM8AQ9HCN3 771 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 RBM12Q9NTZ6 932 aaKnown RBP21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 TRPM5Q9NZQ8 1165 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 ATP8B3O60423 1300 aa21.23■□□□□ 0.99
SHCBP1-203ENST00000564272 USP34Q70CQ2 3546 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 CETN3O15182 167 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 GADD45BO75293 160 aaPredicted RBP21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 EPB41P11171 864 aaKnown RBP21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 ARSAP15289 507 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 MTF1Q14872 753 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 PON2Q15165 354 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 FUKQ8N0W3 1084 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 TWNKQ96RR1 684 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 KCNK16Q96T55 309 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 PRMT8Q9NR22 394 aaPredicted RBP21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 KRT82Q9NSB4 513 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 FAM49BQ9NUQ9 324 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 EHD2Q9NZN4 543 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 HOOK1Q9UJC3 728 aaKnown RBP21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 FBXO4Q9UKT5 387 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 FANCMQ8IYD8 2048 aa21.22■□□□□ 0.99
SHCBP1-203ENST00000564272 TRIM49BA6NDI0 452 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 ZNF840PA6NDX5 716 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 OTOL1A6NHN0 477 aaPredicted RBP21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 HDCP19113 662 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 TAF10Q12962 218 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 RUNX3Q13761 415 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 KRT39Q6A163 491 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 ANKRD40Q6AI12 368 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 ISM2Q6H9L7 571 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 CC2D1AQ6P1N0 951 aaPredicted RBP21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 C1orf228Q6PIY5 440 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 TSSK4Q6SA08 328 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 ADSSL1Q8N142 457 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 SLC2A14Q8TDB8 520 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 SH3RF2Q8TEC5 729 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 SMARCD1Q96GM5 515 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 TSG101Q99816 390 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 NIF3L1Q9GZT8 377 aa21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 DMAP1Q9NPF5 467 aaPredicted RBP21.21■□□□□ 0.99
SHCBP1-203ENST00000564272 VPS13AQ96RL7 3174 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 KINO60870 393 aaKnown RBP21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 AP1G2O75843 785 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 CD58P19256 250 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 GTF2H1P32780 548 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 MXI1P50539 228 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 MCCD1P59942 119 aaPredicted RBP21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 INCA1Q0VD86 236 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 ZC3H14Q6PJT7 736 aaKnown RBP21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 UNC93AQ86WB7 457 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 ZC3H3Q8IXZ2 948 aaKnown RBP21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 NUP93Q8N1F7 819 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 CRYBG2Q8N1P7 616 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 C12orf29Q8N999 325 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 SEMA4DQ92854 862 aa21.2■□□□□ 0.98
SHCBP1-203ENST00000564272 MAN1B1Q9UKM7 699 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms