RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SEMA4GQ9NTN9 838 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 ARHGAP26Q9UNA1 814 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 CCDC163A0A0D9SF12 145 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 PVALEFA0A1B0GWK0 134 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 FAM163BP0C2L3 166 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 PDIA4P13667 645 aaKnown RBP25.48■■□□□ 1.67
NME3-206ENST00000564252 HDCP19113 662 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 ANXA13P27216 316 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 IFNAR2P48551 515 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 PXNP49023 591 aaPredicted RBP25.48■■□□□ 1.67
NME3-206ENST00000564252 WDR72Q3MJ13 1102 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 EZH1Q92800 747 aaPredicted RBP25.48■■□□□ 1.67
NME3-206ENST00000564252 RTKNQ9BST9 563 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 FAM13BQ9NYF5 915 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 CGNQ9P2M7 1197 aaKnown RBP25.48■■□□□ 1.67
NME3-206ENST00000564252 SPTBN2O15020 2390 aa25.48■■□□□ 1.67
NME3-206ENST00000564252 TRIM66O15016 1216 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 STAU1O95793 577 aaKnown RBP25.47■■□□□ 1.67
NME3-206ENST00000564252 AFMP43652 599 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 ME1P48163 572 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 TNNC1P63316 161 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 ZXDBP98169 803 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 CSRP2Q16527 193 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 OR6B3Q8NGW1 331 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 C8orf48Q96LL4 319 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 XYLT2Q9H1B5 865 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 POLR3BQ9NW08 1133 aaPredicted RBP25.47■■□□□ 1.67
NME3-206ENST00000564252 TRPM5Q9NZQ8 1165 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 SLC8A2Q9UPR5 921 aa25.47■■□□□ 1.67
NME3-206ENST00000564252 RALGAPA1Q6GYQ0 2036 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.46■■□□□ 1.67
NME3-206ENST00000564252 F8VP50 259 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 PFKLP17858 780 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 PTPN1P18031 435 aaKnown RBP25.46■■□□□ 1.67
NME3-206ENST00000564252 PDE6CP51160 858 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 CACNA2D1P54289 1103 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 MYL6P60660 151 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 NOP14P78316 857 aaKnown RBP25.46■■□□□ 1.67
NME3-206ENST00000564252 KNOP1Q1ED39 458 aaKnown RBP25.46■■□□□ 1.67
NME3-206ENST00000564252 FBXO43Q4G163 708 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 PRR23CQ6ZRP0 262 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 GRAMD1CQ8IYS0 662 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 GAB3Q8WWW8 586 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 CD101Q93033 1021 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 EXOC4Q96A65 974 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 LINC00597Q9H2U6 94 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 DPEP3Q9H4B8 488 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 TMEM30AQ9NV96 361 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 MYO16Q9Y6X6 1858 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 KIAA1549LQ6ZVL6 1849 aa25.46■■□□□ 1.67
NME3-206ENST00000564252 ATICP31939 592 aa25.45■■□□□ 1.66
NME3-206ENST00000564252 TRPC3Q13507 836 aa25.45■■□□□ 1.66
NME3-206ENST00000564252 PKP1Q13835 747 aa25.45■■□□□ 1.66
NME3-206ENST00000564252 ATL3Q6DD88 541 aa25.45■■□□□ 1.66
NME3-206ENST00000564252 HSCBQ8IWL3 235 aa25.45■■□□□ 1.66
NME3-206ENST00000564252 PLEKHO2Q8TD55 490 aa25.45■■□□□ 1.66
NME3-206ENST00000564252 EHD2Q9NZN4 543 aa25.45■■□□□ 1.66
NME3-206ENST00000564252 EML5Q05BV3 1969 aa25.45■■□□□ 1.66
NME3-206ENST00000564252 DCDC2BA2VCK2 349 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 ZNF840PA6NDX5 716 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 EXOC3O60645 756 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 RPP40O75818 363 aaKnown RBP25.44■■□□□ 1.66
NME3-206ENST00000564252 CASP4P49662 377 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 CAMKK1Q8N5S9 505 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 RPLP0P6Q8NHW5 317 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 NETO1Q8TDF5 533 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 ZNF518BQ9C0D4 1074 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 ELOVL4Q9GZR5 314 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 NXF1Q9UBU9 619 aaKnown RBP25.44■■□□□ 1.66
NME3-206ENST00000564252 SPAG17Q6Q759 2223 aa25.44■■□□□ 1.66
NME3-206ENST00000564252 A8MXQ7 604 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 LEFTY2O00292 366 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 KLRC4O43908 158 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 PPP3CCP48454 512 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 SLC7A9P82251 487 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 NR1H3Q13133 447 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 B3GALNT2Q8NCR0 500 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 SYAP1Q96A49 352 aaPredicted RBP25.43■■□□□ 1.66
NME3-206ENST00000564252 HHIPQ96QV1 700 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 B3GNT5Q9BYG0 378 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 RNF38Q9H0F5 515 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 VRTNQ9H8Y1 702 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 SERTAD1Q9UHV2 236 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 RCOR1Q9UKL0 485 aa25.43■■□□□ 1.66
NME3-206ENST00000564252 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.42■■□□□ 1.66
NME3-206ENST00000564252 CLDN5O00501 218 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 ACTN4O43707 911 aaKnown RBP25.42■■□□□ 1.66
NME3-206ENST00000564252 NFATC1O95644 943 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 OLFM2O95897 454 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 HSP90AA1P07900 732 aaKnown RBP25.42■■□□□ 1.66
NME3-206ENST00000564252 SLFN14P0C7P3 912 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 DNM1Q05193 864 aaKnown RBP25.42■■□□□ 1.66
NME3-206ENST00000564252 TDRD10Q5VZ19 366 aaKnown RBP25.42■■□□□ 1.66
NME3-206ENST00000564252 SYT13Q7L8C5 426 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 CACNA2D4Q7Z3S7 1137 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 KBTBD6Q86V97 674 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 CEP57L1Q8IYX8 460 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 GOLGA5Q8TBA6 731 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 PARD3BQ8TEW8 1205 aa25.42■■□□□ 1.66
NME3-206ENST00000564252 LOXL4Q96JB6 756 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms