RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 PRPF6O94906 941 aaKnown RBP10.87□□□□□ -0.67
SNX29-202ENST00000563308 ATF6P18850 670 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 ALDH1A3P47895 512 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 DGKEP52429 567 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 EPHB3P54753 998 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 GFPT1Q06210 699 aaPredicted RBP10.87□□□□□ -0.67
SNX29-202ENST00000563308 PLD1Q13393 1074 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 SERINC3Q13530 473 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 ALCAMQ13740 583 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 STK38Q15208 465 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 ARMCX5Q6P1M9 558 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 SHC4Q6S5L8 630 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 ZNF574Q6ZN55 896 aaPredicted RBP10.87□□□□□ -0.67
SNX29-202ENST00000563308 NT5DC4Q86YG4 428 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 MFSD6LQ8IWD5 586 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
SNX29-202ENST00000563308 E2F7Q96AV8 911 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 WBP1Q96G27 269 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 HHIPQ96QV1 700 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 LPIN3Q9BQK8 851 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 TRIM9Q9C026 710 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 IL21Q9HBE4 155 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 TMLHEQ9NVH6 421 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 SIX4Q9UIU6 781 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 DNMT3LQ9UJW3 386 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 DSEQ9UL01 958 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 EXOC7Q9UPT5 735 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 ASB3Q9Y575 518 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 PLXNB3Q9ULL4 1909 aa10.87□□□□□ -0.67
SNX29-202ENST00000563308 PTPRJQ12913 1337 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 HEPACAM2A8MVW5 462 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 YEATS4O95619 227 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 APBB3O95704 486 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 HAPLN1P10915 354 aaPredicted RBP10.86□□□□□ -0.67
SNX29-202ENST00000563308 POLR2BP30876 1174 aaKnown RBP10.86□□□□□ -0.67
SNX29-202ENST00000563308 TFAMQ00059 246 aaKnown RBP10.86□□□□□ -0.67
SNX29-202ENST00000563308 RHDQ02161 417 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 FCHO2Q0JRZ9 810 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 CNNM4Q6P4Q7 775 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 EPM2AIP1Q7L775 607 aaPredicted RBP10.86□□□□□ -0.67
SNX29-202ENST00000563308 LIMS2Q7Z4I7 341 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 GPIHBP1Q8IV16 184 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 PDCL2Q8N4E4 241 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 PKMYT1Q99640 499 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 FAM117AQ9C073 453 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 GPR88Q9GZN0 384 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 TNMDQ9H2S6 317 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 PCIF1Q9H4Z3 704 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 PDE11AQ9HCR9 933 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 RBAKQ9NYW8 714 aaPredicted RBP10.86□□□□□ -0.67
SNX29-202ENST00000563308 L1RE1Q9UN81 338 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 AGAP1Q9UPQ3 857 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 LAMA1P25391 3075 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 THADAQ6YHU6 1953 aa10.86□□□□□ -0.67
SNX29-202ENST00000563308 TGFB1I1O43294 461 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 CUTAO60888 179 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 PRAMEF12O95522 483 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 LDHAP00338 332 aaKnown RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 ITGB3P05106 788 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 HMGA1P17096 107 aaKnown RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 WEE1P30291 646 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 CTHP32929 405 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 PNPLA4P41247 253 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 SOX9P48436 509 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 TUFMP49411 452 aaKnown RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 CXADRP78310 365 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 EHHADHQ08426 723 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 GRSF1Q12849 480 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNX29-202ENST00000563308 PKP1Q13835 747 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 CCINQ13939 588 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 CCDC142Q17RM4 750 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 SV2CQ496J9 727 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 WDR44Q5JSH3 913 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 FOXD4L5Q5VV16 416 aaPredicted RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 TMPRSS7Q7RTY8 843 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 TMEM150AQ86TG1 271 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 OSTM1Q86WC4 334 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 METTL23Q86XA0 190 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 SYT12Q8IV01 421 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 ARID3BQ8IVW6 561 aaPredicted RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 CCDC65Q8IXS2 484 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 SYCP3Q8IZU3 236 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 LRRC52Q8N7C0 313 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 OR5B17Q8NGF7 314 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 C2orf15Q8WU43 125 aaKnown RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 FOXD4L4Q8WXT5 416 aaPredicted RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 ZNF560Q96MR9 790 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 SEPT5Q99719 369 aaPredicted RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 C7orf25Q9BPX7 421 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 TMEM206Q9H813 350 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 GDAP2Q9NXN4 497 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 MBD1Q9UIS9 605 aaPredicted RBP10.85□□□□□ -0.67
SNX29-202ENST00000563308 INVSQ9Y283 1065 aa10.85□□□□□ -0.67
SNX29-202ENST00000563308 DOPEY2Q9Y3R5 2298 aa10.84□□□□□ -0.67
SNX29-202ENST00000563308 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
SNX29-202ENST00000563308 E9PAM4 449 aa10.84□□□□□ -0.67
SNX29-202ENST00000563308 HCRTO43612 131 aa10.84□□□□□ -0.67
SNX29-202ENST00000563308 ZSCAN22P10073 491 aaPredicted RBP10.84□□□□□ -0.67
SNX29-202ENST00000563308 HLA-EP13747 358 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms