RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 NPHP1O15259 732 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 CCP110O43303 1012 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 PROM1O43490 865 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 MT-ND5P03915 603 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 ANXA2P07355 339 aaKnown RBP3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 PARP1P09874 1014 aaKnown RBP3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 CD6P30203 668 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 PLA2G5P39877 138 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 STT3AP46977 705 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 PXNP49023 591 aaPredicted RBP3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 LILRA4P59901 499 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 SATB1Q01826 763 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 MGAT5BQ3V5L5 792 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 PLA1AQ53H76 456 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 RBM20Q5T481 1227 aaKnown RBP3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 SFRP4Q6FHJ7 346 aaPredicted RBP3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 VWA1Q6PCB0 445 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 LAYNQ6UX15 382 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 MPP5Q8N3R9 675 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 SDR16C5Q8N3Y7 309 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 ANKRD42Q8N9B4 389 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 FAM98AQ8NCA5 519 aaKnown RBP3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 SSH3Q8TE77 659 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 BRI3BPQ8WY22 251 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 PTCD3Q96EY7 689 aaKnown RBP3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 RIPOR3Q96MK2 946 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 PPP1R9BQ96SB3 815 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 AMBRA1Q9C0C7 1298 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 MYO1AQ9UBC5 1043 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 SALL3Q9BXA9 1300 aa3.92□□□□□ -1.78
SHCBP1-202ENST00000563219 LOC102723971A0A1B0GUV8 181 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 POM121BA6NF01 834 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 CLCA1A8K7I4 914 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 NCK2O43639 380 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 PIP5K1CO60331 668 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 SETSIPP0DME0 302 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ZNF37AP17032 561 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ABCB4P21439 1286 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 KCNA3P22001 575 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 TNFSF4P23510 183 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 LMO1P25800 156 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 HALP42357 657 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 PTH2RP49190 550 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 CARSP49589 748 aaKnown RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 DGKEP52429 567 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ELLP55199 621 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 MYO1EQ12965 1108 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 INSCQ1MX18 579 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ZIK1Q3SY52 487 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 INO80DQ53TQ3 878 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 VPS53Q5VIR6 699 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 IZUMO3Q5VZ72 239 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ICE2Q659A1 982 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 CCDC174Q6PII3 467 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ZDHHC24Q6UX98 284 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 TOGARAM2Q6ZUX3 1019 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 UNC13DQ70J99 1090 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 YAF2Q8IY57 180 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 CCDC33Q8N5R6 958 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 OR2C3Q8N628 320 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ATP11CQ8NB49 1132 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 SLC30A5Q8TAD4 765 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 DEPTORQ8TB45 409 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 CAGE1Q8TC20 777 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 IPCEF1Q8WWN9 437 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 RAPGEF4Q8WZA2 1011 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 NELL1Q92832 810 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 KIAA1191Q96A73 305 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 SGCZQ96LD1 299 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 CRB3Q9BUF7 120 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 STK31Q9BXU1 1019 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ZSCAN32Q9NX65 697 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 KCTD5Q9NXV2 234 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 DNMT3BQ9UBC3 853 aaKnown RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 NDRG4Q9ULP0 352 aaKnown RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 CAPN11Q9UMQ6 739 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 SSX2IPQ9Y2D8 614 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 MORC2Q9Y6X9 1032 aaPredicted RBP3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 SPATA31A6Q5VVP1 1343 aa3.91□□□□□ -1.78
SHCBP1-202ENST00000563219 ABHD14A-ACY1A0A1B0GW23 586 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 AREL1O15033 823 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 THAP12O43422 761 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 SH3BP5O60239 455 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 RASSF9O75901 435 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 FGF18O76093 207 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 INMTO95050 263 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 A1BGP04217 495 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 PPP3CBP16298 524 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 BTF3P20290 206 aaKnown RBP3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 FGFR2P21802 821 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 ACVR2AP27037 513 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 IL1R2P27930 398 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 PPM1FP49593 454 aaPredicted RBP3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 HNRNPMP52272 730 aaKnown RBP eCLIP3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 NXPH1P58417 271 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 KRT17Q04695 432 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 ITIH3Q06033 890 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 ARHGEF7Q14155 803 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 E2F2Q14209 437 aa3.9□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF169Q14929 603 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms