RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 ENGASEQ8NFI3 743 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 BEST2Q8NFU1 509 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 LNX1Q8TBB1 728 aaPredicted RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 TP53INP1Q96A56 240 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 FBXL18Q96ME1 805 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 UHRF1Q96T88 793 aaPredicted RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 CLSTN3Q9BQT9 956 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 S1PR5Q9H228 398 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 PDE11AQ9HCR9 933 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 ABCB6Q9NP58 842 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 AGPAT3Q9NRZ7 376 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 DPP3Q9NY33 737 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 RBAKQ9NYW8 714 aaPredicted RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 HSPBP1Q9NZL4 362 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 UBQLN1Q9UMX0 589 aaKnown RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 NUB1Q9Y5A7 615 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 IRAK3Q9Y616 596 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 TRIOO75962 3097 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 TMEM189-UBE2V1I3L0A0 370 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 TGM5O43548 720 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 TRAPPC3O43617 180 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 ADAM11O75078 769 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 RFPL2O75678 378 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 IL18RAPO95256 599 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 B3GALT4O96024 378 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 LDHAP00338 332 aaKnown RBP6.26□□□□□ -1.41
CDH13-206ENST00000562601 CYP11A1P05108 521 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 ADRB2P07550 413 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 H2AFB1P0C5Y9 115 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 H2AFB2P0C5Z0 115 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 SRGAP2BP0DMP2 458 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 CYP3A5P20815 502 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 OR1D2P34982 312 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 FAM160A1Q05DH4 1040 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 PSMD2Q13200 908 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 SMAD4Q13485 552 aaKnown RBP6.26□□□□□ -1.41
CDH13-206ENST00000562601 KNOP1Q1ED39 458 aaKnown RBP6.26□□□□□ -1.41
CDH13-206ENST00000562601 UVSSAQ2YD98 709 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDH13-206ENST00000562601 SPATA1Q5VX52 437 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 C9orf57Q5W0N0 161 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 TMC5Q6UXY8 1006 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 DSTYKQ6XUX3 929 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 TMEM184AQ6ZMB5 413 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.26□□□□□ -1.41
CDH13-206ENST00000562601 BRSK2Q8IWQ3 736 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 CASP10Q92851 521 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 CCDC127Q96BQ5 260 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 FRMD6Q96NE9 622 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
CDH13-206ENST00000562601 BCO2Q9BYV7 579 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 RXFP1Q9HBX9 757 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 CD320Q9NPF0 282 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 MAN1C1Q9NR34 630 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 KCNK4Q9NYG8 393 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 STK39Q9UEW8 545 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 AGAP1Q9UPQ3 857 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 SSX2IPQ9Y2D8 614 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 USP15Q9Y4E8 981 aaPredicted RBP6.26□□□□□ -1.41
CDH13-206ENST00000562601 CDY1Q9Y6F8 540 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 TTC28Q96AY4 2481 aa6.26□□□□□ -1.41
CDH13-206ENST00000562601 PTPRJQ12913 1337 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 NCOR1O75376 2440 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 CCDC195A0A1B0GUA6 201 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 ZNF233A6NK53 670 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 PIRO00625 290 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 DDX3YO15523 660 aaKnown RBP6.25□□□□□ -1.41
CDH13-206ENST00000562601 XPOTO43592 962 aaKnown RBP6.25□□□□□ -1.41
CDH13-206ENST00000562601 EXOC3O60645 756 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 RHOBTB3O94955 611 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 WISP1O95388 367 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 GLUD1P00367 558 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 ITGB3P05106 788 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 KRT19P08727 400 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 FURINP09958 794 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 OR4Q2P0C623 313 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 DLATP10515 647 aaKnown RBP6.25□□□□□ -1.41
CDH13-206ENST00000562601 LRPAP1P30533 357 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 POLR2BP30876 1174 aaKnown RBP6.25□□□□□ -1.41
CDH13-206ENST00000562601 CASP4P49662 377 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 LILRA4P59901 499 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 ELAVL2Q12926 359 aaKnown RBP6.25□□□□□ -1.41
CDH13-206ENST00000562601 SMAD2Q15796 467 aaKnown RBP6.25□□□□□ -1.41
CDH13-206ENST00000562601 SNRNP35Q16560 246 aaKnown RBP6.25□□□□□ -1.41
CDH13-206ENST00000562601 CAMK4Q16566 473 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 BMT2Q1RMZ1 405 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 CTXN3Q4LDR2 81 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 ANKRD34AQ69YU3 496 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 LILRA6Q6PI73 481 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 HS2ST1Q7LGA3 356 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 PPFIBP1Q86W92 1011 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 CD302Q8IX05 232 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 AGGF1Q8N302 714 aaeCLIP6.25□□□□□ -1.41
CDH13-206ENST00000562601 CSGALNACT2Q8N6G5 542 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 XXYLT1Q8NBI6 393 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 SMRP1Q8NCR6 262 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 KREMEN2Q8NCW0 462 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 OR5B17Q8NGF7 314 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 UBASH3BQ8TF42 649 aa6.25□□□□□ -1.41
CDH13-206ENST00000562601 CCDC47Q96A33 483 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms