RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 FILIP1Q7Z7B0 1213 aa19.76■□□□□ 0.75
KATNB1-202ENST00000562542 SPATA2LQ8IUW3 424 aaPredicted RBP19.76■□□□□ 0.75
KATNB1-202ENST00000562542 ADAMTS14Q8WXS8 1223 aa19.76■□□□□ 0.75
KATNB1-202ENST00000562542 DDX43Q9NXZ2 648 aaKnown RBP19.76■□□□□ 0.75
KATNB1-202ENST00000562542 PTPRDP23468 1912 aa19.76■□□□□ 0.75
KATNB1-202ENST00000562542 TCHHQ07283 1943 aa19.76■□□□□ 0.75
KATNB1-202ENST00000562542 ADAMTS9Q9P2N4 1935 aa19.76■□□□□ 0.75
KATNB1-202ENST00000562542 SMG1Q96Q15 3661 aaKnown RBP19.75■□□□□ 0.75
KATNB1-202ENST00000562542 FLNBO75369 2602 aaKnown RBP19.75■□□□□ 0.75
KATNB1-202ENST00000562542 GON4LQ3T8J9 2241 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 PI4KAP42356 2102 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 LEFTY2O00292 366 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 SLC6A11P48066 632 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 SLC12A3P55017 1021 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 MYL7Q01449 175 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 ZNF33AQ06730 810 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 IL17AQ16552 155 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 SLC36A4Q6YBV0 504 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 CCNI2Q6ZMN8 369 aaPredicted RBP19.75■□□□□ 0.75
KATNB1-202ENST00000562542 PDCL2Q8N4E4 241 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 MYCT1Q8N699 235 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 BBC3Q96PG8 261 aaPredicted RBP19.75■□□□□ 0.75
KATNB1-202ENST00000562542 ACBD6Q9BR61 282 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 ARHGEF4Q9NR80 690 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 DNAAF2Q9NVR5 837 aaKnown RBP19.75■□□□□ 0.75
KATNB1-202ENST00000562542 GTF3C4Q9UKN8 822 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 PCDHB6Q9Y5E3 794 aa19.75■□□□□ 0.75
KATNB1-202ENST00000562542 LAD1O00515 517 aa19.74■□□□□ 0.75
KATNB1-202ENST00000562542 SCAMP3O14828 347 aaKnown RBP19.74■□□□□ 0.75
KATNB1-202ENST00000562542 SCP2P22307 547 aa19.74■□□□□ 0.75
KATNB1-202ENST00000562542 ANAPC15P60006 121 aa19.74■□□□□ 0.75
KATNB1-202ENST00000562542 ATP2C1P98194 919 aaPredicted RBP19.74■□□□□ 0.75
KATNB1-202ENST00000562542 DHCR24Q15392 516 aa19.74■□□□□ 0.75
KATNB1-202ENST00000562542 INTS6LQ5JSJ4 861 aaKnown RBP19.74■□□□□ 0.75
KATNB1-202ENST00000562542 ADALQ6DHV7 355 aa19.74■□□□□ 0.75
KATNB1-202ENST00000562542 SLC39A4Q6P5W5 647 aa19.74■□□□□ 0.75
KATNB1-202ENST00000562542 APOBEC2Q9Y235 224 aaKnown RBP19.74■□□□□ 0.75
KATNB1-202ENST00000562542 SLC9A3R1O14745 358 aaPredicted RBP19.73■□□□□ 0.75
KATNB1-202ENST00000562542 HUS1O60921 280 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 ADAM23O75077 832 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 FAM13AO94988 1023 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 PNPLA4P41247 253 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 GRIA2P42262 883 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 MESP2Q0VG99 397 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 SLC14A1Q13336 389 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 NAXDQ8IW45 347 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 FBXO18Q8NFZ0 1043 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 PNMA5Q96PV4 448 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 REEP2Q9BRK0 252 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 ZHX3Q9H4I2 956 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 SMPD4Q9NXE4 827 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 ODF2LQ9ULJ1 636 aa19.73■□□□□ 0.75
KATNB1-202ENST00000562542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.72■□□□□ 0.75
KATNB1-202ENST00000562542 ZBTB24O43167 697 aaPredicted RBP19.72■□□□□ 0.75
KATNB1-202ENST00000562542 ADH1CP00326 375 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 EIF2DP41214 584 aaKnown RBP19.72■□□□□ 0.75
KATNB1-202ENST00000562542 PRPHP41219 470 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 KIR2DL1P43626 348 aaPredicted RBP19.72■□□□□ 0.75
KATNB1-202ENST00000562542 ZXDBP98169 803 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 ST3GAL1Q11201 340 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 CCDC142Q17RM4 750 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 PLEKHG6Q3KR16 790 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 C12orf40Q86WS4 652 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 RGL4Q8IZJ4 473 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 ADGRG2Q8IZP9 1017 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 GLIS3Q8NEA6 775 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 HSPA12BQ96MM6 686 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 TRPM5Q9NZQ8 1165 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 CALCOCO1Q9P1Z2 691 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 AGO2Q9UKV8 859 aaKnown RBP19.72■□□□□ 0.75
KATNB1-202ENST00000562542 L1RE1Q9UN81 338 aa19.72■□□□□ 0.75
KATNB1-202ENST00000562542 ANKRD63C9JTQ0 380 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 ABL1P00519 1130 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 ADH5P11766 374 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 POLR2BP30876 1174 aaKnown RBP19.71■□□□□ 0.75
KATNB1-202ENST00000562542 TNFRSF4P43489 277 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 TOB1P50616 345 aaPredicted RBP19.71■□□□□ 0.75
KATNB1-202ENST00000562542 NEK4P51957 841 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 DHX8Q14562 1220 aaKnown RBP19.71■□□□□ 0.75
KATNB1-202ENST00000562542 CFAP221Q4G0U5 840 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 ARSHQ5FYA8 562 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 HYIQ5T013 277 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 TRMT11Q7Z4G4 463 aaKnown RBP19.71■□□□□ 0.75
KATNB1-202ENST00000562542 GPBP1Q86WP2 473 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 TMEM86AQ8N2M4 240 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 TRIML1Q8N9V2 468 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 KCNN1Q92952 543 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 PARVGQ9HBI0 331 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 SCUBE2Q9NQ36 999 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 AGAP1Q9UPQ3 857 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 CPQQ9Y646 472 aa19.71■□□□□ 0.75
KATNB1-202ENST00000562542 PLXND1Q9Y4D7 1925 aa19.7■□□□□ 0.74
KATNB1-202ENST00000562542 PCDH15Q96QU1 1955 aa19.7■□□□□ 0.74
KATNB1-202ENST00000562542 A0A1W2PQD8 194 aa19.7■□□□□ 0.74
KATNB1-202ENST00000562542 TBC1D3BA6NDS4 549 aa19.7■□□□□ 0.74
KATNB1-202ENST00000562542 TISP43B9A030 160 aa19.7■□□□□ 0.74
KATNB1-202ENST00000562542 TRAK2O60296 914 aa19.7■□□□□ 0.74
KATNB1-202ENST00000562542 KRT18P05783 430 aaKnown RBP19.7■□□□□ 0.74
KATNB1-202ENST00000562542 CHRM1P11229 460 aaPredicted RBP19.7■□□□□ 0.74
KATNB1-202ENST00000562542 PFKLP17858 780 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms