RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ANKRD52Q8NB46 1076 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 RBBP8NLQ8NC74 664 aaPredicted RBP14.23□□□□□ -0.13
CDH1-204ENST00000562118 SHKBP1Q8TBC3 707 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 ADAMTS19Q8TE59 1207 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 TFAP2BQ92481 460 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 NAP1L5Q96NT1 182 aaPredicted RBP14.23□□□□□ -0.13
CDH1-204ENST00000562118 MYADMQ96S97 322 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 CORO1BQ9BR76 489 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 DUSP16Q9BY84 665 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 PIDD1Q9HB75 910 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 TRPV4Q9HBA0 871 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 KRT82Q9NSB4 513 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 FAM49BQ9NUQ9 324 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 GDE1Q9NZC3 331 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDH1-204ENST00000562118 NR2E1Q9Y466 385 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 FHOD1Q9Y613 1164 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 ANHXE9PGG2 379 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 TEX33O43247 280 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 AP1G2O75843 785 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 ZDHHC11BP0C7U3 371 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 FAM200BP0CF97 657 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 CDK11BP21127 795 aaKnown RBP14.22□□□□□ -0.13
CDH1-204ENST00000562118 KLK7P49862 253 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 USP46P62068 366 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 SYCP1Q15431 976 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 CNGA2Q16280 664 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 ZNF394Q53GI3 561 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 SGO2Q562F6 1265 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 DENND5BQ6ZUT9 1274 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 PDZD4Q76G19 769 aaPredicted RBP14.22□□□□□ -0.13
CDH1-204ENST00000562118 OVCA2Q8WZ82 227 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 FGF13Q92913 245 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 TCEAL4Q96EI5 215 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 KCNK16Q96T55 309 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 LSM14BQ9BX40 385 aaKnown RBP14.22□□□□□ -0.13
CDH1-204ENST00000562118 STK33Q9BYT3 514 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 TTYH3Q9C0H2 523 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 CD320Q9NPF0 282 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 UXTQ9UBK9 157 aaPredicted RBP14.22□□□□□ -0.13
CDH1-204ENST00000562118 ZMYM5Q9UJ78 669 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 DNAJC12Q9UKB3 198 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 CDH7Q9ULB5 785 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 PCDHB4Q9Y5E5 795 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 USP3Q9Y6I4 520 aa14.22□□□□□ -0.13
CDH1-204ENST00000562118 F8VZ95 297 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 FOXN3O00409 490 aaPredicted RBP14.21□□□□□ -0.13
CDH1-204ENST00000562118 CLSTN1O94985 981 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 LAMP2P13473 410 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 CEBPBP17676 345 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 FCARP24071 287 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 CDC25CP30307 473 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 CLCN1P35523 988 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 GRIK1P39086 918 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 CDR1P51861 262 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 SLC5A3P53794 718 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 BCAT1P54687 386 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 UBXN1Q04323 297 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 MTMR3Q13615 1198 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 SDHAF4Q5VUM1 108 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 SCML4Q8N228 414 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 GPR152Q8TDT2 470 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 GIPC2Q8TF65 315 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 HEXIM2Q96MH2 286 aaKnown RBP14.21□□□□□ -0.13
CDH1-204ENST00000562118 EHD2Q9NZN4 543 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 TSPAN16Q9UKR8 245 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 PCDHGC3Q9UN70 934 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 CUL9Q8IWT3 2517 aa14.21□□□□□ -0.13
CDH1-204ENST00000562118 MYO10Q9HD67 2058 aa14.21□□□□□ -0.14
CDH1-204ENST00000562118 XPO1O14980 1071 aaKnown RBP14.2□□□□□ -0.14
CDH1-204ENST00000562118 RTN3O95197 1032 aaPredicted RBP14.2□□□□□ -0.14
CDH1-204ENST00000562118 OLFM2O95897 454 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 SETSIPP0DME0 302 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 PFKLP17858 780 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 DDX6P26196 483 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDH1-204ENST00000562118 ANXA13P27216 316 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 PLA2G4AP47712 749 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 PPP3CCP48454 512 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 FANCCQ00597 558 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 BST2Q10589 180 aaKnown RBP14.2□□□□□ -0.14
CDH1-204ENST00000562118 HTR4Q13639 388 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 DRAP1Q14919 205 aaPredicted RBP14.2□□□□□ -0.14
CDH1-204ENST00000562118 FIGNQ5HY92 759 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 CYP4A22Q5TCH4 519 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 GET4Q7L5D6 327 aaPredicted RBP14.2□□□□□ -0.14
CDH1-204ENST00000562118 SCN4BQ8IWT1 228 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 NUP93Q8N1F7 819 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 TDRD5Q8NAT2 981 aaKnown RBP14.2□□□□□ -0.14
CDH1-204ENST00000562118 STKLD1Q8NE28 680 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 SLC35F5Q8WV83 523 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 KCTD13Q8WZ19 329 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 NXPE3Q969Y0 559 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 UHRF1Q96T88 793 aaPredicted RBP14.2□□□□□ -0.14
CDH1-204ENST00000562118 MYO6Q9UM54 1294 aa14.2□□□□□ -0.14
CDH1-204ENST00000562118 MRPS23Q9Y3D9 190 aaKnown RBP14.2□□□□□ -0.14
CDH1-204ENST00000562118 A0A1W2PRU2 124 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 GABRR2P28476 465 aa14.19□□□□□ -0.14
CDH1-204ENST00000562118 ADORA2BP29275 332 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms