RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 TROVE2P10155 538 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK3-206ENST00000562078 RARBP10826 455 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 ESRRAP11474 423 aaPredicted RBP13.9□□□□□ -0.18
CLK3-206ENST00000562078 VCLP18206 1134 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 CA8P35219 290 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 OAZ1P54368 228 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 AP2B1P63010 937 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 PDK3Q15120 406 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 LPCAT4Q643R3 524 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 TTC7BQ86TV6 843 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 NUP93Q8N1F7 819 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
CLK3-206ENST00000562078 MKNK1Q9BUB5 465 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 STRA6Q9BX79 667 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 ADAM33Q9BZ11 813 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 TBCCD1Q9NVR7 557 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK3-206ENST00000562078 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 C2orf71A6NGG8 1288 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 WDR64B1ANS9 1081 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 TISP43B9A030 160 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 TXNDC9O14530 226 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 ADCY3O60266 1144 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 TCEA3O75764 348 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 GSTT2P0CG29 244 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 GSTT2BP0CG30 244 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 UQCRBP14927 111 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 NFKBIAP25963 317 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 CCND2P30279 289 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 CHN2P52757 468 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 ITGA7Q13683 1181 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 TRIP13Q15645 432 aaPredicted RBP13.9□□□□□ -0.18
CLK3-206ENST00000562078 MAPK6Q16659 721 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 FYB2Q5VWT5 728 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 SAPCD2Q86UD0 394 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 ZNF75CPQ92670 426 aaPredicted RBP13.9□□□□□ -0.18
CLK3-206ENST00000562078 MAML3Q96JK9 1138 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 ARPC5LQ9BPX5 153 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 TEX13BQ9BXU2 312 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 GRIP2Q9C0E4 1043 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 DMAC2Q9NW81 257 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 ADAMTS5Q9UNA0 930 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 KCNH4Q9UQ05 1017 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 ACTL7BQ9Y614 415 aa13.9□□□□□ -0.18
CLK3-206ENST00000562078 A0A0G2JMZ2 1700 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 WDR91A4D1P6 747 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 F8W8V4 182 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 CELF2O95319 508 aaKnown RBP13.89□□□□□ -0.19
CLK3-206ENST00000562078 LYPLA2O95372 231 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 NR3C2P08235 984 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 SLC5A2P31639 672 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 PIK3CAP42336 1068 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 RXRGP48443 463 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 JAK3P52333 1124 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 HDAC4P56524 1084 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 KRT76Q01546 638 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 ASPHQ12797 758 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 FBXL19Q6PCT2 694 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 RHBDF2Q6PJF5 856 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 SLC2A7Q6PXP3 512 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 UGT2A3Q6UWM9 527 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 RDH13Q8NBN7 331 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 OLIG1Q8TAK6 271 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 MAML1Q92585 1016 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 C9orf72Q96LT7 481 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 THAP2Q9H0W7 228 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 RBM38Q9H0Z9 239 aaKnown RBP13.89□□□□□ -0.19
CLK3-206ENST00000562078 GBA2Q9HCG7 927 aaPredicted RBP13.89□□□□□ -0.19
CLK3-206ENST00000562078 GPRC5CQ9NQ84 441 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 EURLQ9NYK6 297 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 ARMCX1Q9P291 453 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 TELO2Q9Y4R8 837 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 ALG6Q9Y672 507 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 NCANO14594 1321 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 GTPBP10A4D1E9 387 aaKnown RBP13.89□□□□□ -0.19
CLK3-206ENST00000562078 E9PBE3 544 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 RPL5P46777 297 aaKnown RBP13.89□□□□□ -0.19
CLK3-206ENST00000562078 FMO5P49326 533 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 RAP1GDS1P52306 607 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 NAA20P61599 178 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 PSMC5P62195 406 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 NCOA4Q13772 614 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 MYLK3Q32MK0 819 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 MMEL1Q495T6 779 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 Q6ZNX1 250 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 TRABD2AQ86V40 505 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 BBS5Q8N3I7 341 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 C2orf69Q8N8R5 385 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 ARHGEF4Q9NR80 690 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 KIAA1522Q9P206 1035 aaPredicted RBP13.89□□□□□ -0.19
CLK3-206ENST00000562078 ASIC3Q9UHC3 531 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 DOLKQ9UPQ8 538 aa13.89□□□□□ -0.19
CLK3-206ENST00000562078 C15orf38-AP3S2A0A0A6YYH1 394 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 H3BRJ5 948 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 PLS3P13797 630 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 CA4P22748 312 aa13.88□□□□□ -0.19
CLK3-206ENST00000562078 ZBTB16Q05516 673 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms