RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SYBUQ9NX95 663 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 PODXLO00592 558 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 FFAR2O15552 330 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 GABRB3P28472 473 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 VAV2P52735 878 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 ITGA8P53708 1063 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 SLC29A2Q14542 456 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 CCDC38Q502W7 563 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 FCRL6Q6DN72 434 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 GAS2L3Q86XJ1 694 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 YAF2Q8IY57 180 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 PPP1R9BQ96SB3 815 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 HEPHQ9BQS7 1158 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 SLITRK6Q9H5Y7 841 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 OBP2BQ9NPH6 170 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 LUZP4Q9P127 313 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 SALL3Q9BXA9 1300 aa7.47□□□□□ -1.21
SMG1-204ENST00000561940 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 CCDC189A1A4V9 331 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 AQP12BA6NM10 295 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 hCG_1984214I3L0E3 225 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 TOR1BO14657 336 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 AREL1O15033 823 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 KCNA2P16389 499 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 AVPR1BP47901 424 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 GCLCP48506 637 aaPredicted RBP7.46□□□□□ -1.22
SMG1-204ENST00000561940 PTDSS1P48651 473 aaKnown RBP7.46□□□□□ -1.22
SMG1-204ENST00000561940 SEC24CP53992 1094 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 TAP1Q03518 808 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 BLMHQ13867 455 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 KCNAB1Q14722 419 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 PGBD2Q6P3X8 592 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 FBXO38Q6PIJ6 1188 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 CRTC1Q6UUV9 634 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 USP49Q70CQ1 688 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 TMPRSS9Q7Z410 1059 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 COLGALT2Q8IYK4 626 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 ATG16L2Q8NAA4 619 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 IPCEF1Q8WWN9 437 aaPredicted RBP7.46□□□□□ -1.22
SMG1-204ENST00000561940 C11orf21Q9P2W6 132 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 MRPS17Q9Y2R5 130 aaKnown RBP7.46□□□□□ -1.22
SMG1-204ENST00000561940 RAD54BQ9Y620 910 aa7.46□□□□□ -1.22
SMG1-204ENST00000561940 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 CSTBP04080 98 aaKnown RBP7.45□□□□□ -1.22
SMG1-204ENST00000561940 GATA3P23771 443 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 CPT1AP50416 773 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 KRT17Q04695 432 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 GRM1Q13255 1194 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 ARHGEF7Q14155 803 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 SF3B3Q15393 1217 aaKnown RBP7.45□□□□□ -1.22
SMG1-204ENST00000561940 NPY5RQ15761 445 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 RAB30Q15771 203 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 PFKFB4Q16877 469 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 TMEM95Q3KNT9 176 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 ARHGAP15Q53QZ3 475 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 PLAG1Q6DJT9 500 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 TMEM108Q6UXF1 575 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 CLNKQ7Z7G1 428 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 SDR16C5Q8N3Y7 309 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 CYP2W1Q8TAV3 490 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 LINC00476Q8WZB0 136 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 MAGEB5Q9BZ81 275 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 TOR3AQ9H497 397 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 HEYLQ9NQ87 328 aaPredicted RBP7.45□□□□□ -1.22
SMG1-204ENST00000561940 IGSF9Q9P2J2 1179 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 DNMT3BQ9UBC3 853 aaKnown RBP7.45□□□□□ -1.22
SMG1-204ENST00000561940 GRHPRQ9UBQ7 328 aa7.45□□□□□ -1.22
SMG1-204ENST00000561940 RGS17Q9UGC6 210 aaPredicted RBP7.45□□□□□ -1.22
SMG1-204ENST00000561940 MYADML2A6NDP7 307 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 LGALS16A8MUM7 142 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 SUV39H1O43463 412 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 RRP9O43818 475 aaKnown RBP7.44□□□□□ -1.22
SMG1-204ENST00000561940 SKAP2O75563 359 aaPredicted RBP7.44□□□□□ -1.22
SMG1-204ENST00000561940 ATXN1LP0C7T5 689 aaKnown RBP7.44□□□□□ -1.22
SMG1-204ENST00000561940 CYP2C9P11712 490 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 MPLP40238 635 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 GRK6P43250 576 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 LOXL3P58215 753 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 COL10A1Q03692 680 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 PDCD2Q16342 344 aaPredicted RBP7.44□□□□□ -1.22
SMG1-204ENST00000561940 PREPLQ4J6C6 727 aaPredicted RBP7.44□□□□□ -1.22
SMG1-204ENST00000561940 CACHD1Q5VU97 1274 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 TLDC1Q6P9B6 456 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 LDHAL6AQ6ZMR3 332 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 SSH3Q8TE77 659 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 CCT6BQ92526 530 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 MOGAT1Q96PD6 335 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 AIFM2Q9BRQ8 373 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.44□□□□□ -1.221e-9■■■■■ 30.8
SMG1-204ENST00000561940 CXorf36Q9H7Y0 433 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 XPNPEP3Q9NQH7 507 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 RGL1Q9NZL6 768 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 SHOC2Q9UQ13 582 aa7.44□□□□□ -1.22
SMG1-204ENST00000561940 PRAMEF33A0A0G2JMD5 474 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 hCG_1642624A0A1W2PR95 340 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 NPC1O15118 1278 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 PRAMEF10O60809 474 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 RHOBTB3O94955 611 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 XRCC6P12956 609 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMG1-204ENST00000561940 VEGFAP15692 232 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms