RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 PPP1R2P3Q6NXS1 205 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 TMC7Q7Z402 723 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 DNAAF5Q86Y56 855 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 PASD1Q8IV76 773 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ADGRF2Q8IZF7 708 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 RNF10Q8N5U6 811 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 SLC4A11Q8NBS3 891 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 MSANTD4Q8NCY6 345 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 APPL2Q8NEU8 664 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 TRIM58Q8NG06 486 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 WHAMMQ8TF30 809 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 UBXN4Q92575 508 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ZNF653Q96CK0 615 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 TRIM11Q96F44 468 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 DDX27Q96GQ7 796 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 TMEM176AQ96HP8 235 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 UROC1Q96N76 676 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 TWNKQ96RR1 684 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 NAPGQ99747 312 aaPredicted RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 MRPL45Q9BRJ2 306 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 NT5C1AQ9BXI3 368 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 UBXN6Q9BZV1 441 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 DNAI2Q9GZS0 605 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ISCUQ9H1K1 167 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ADAM7Q9H2U9 754 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 SMOC2Q9H3U7 446 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ANKZF1Q9H8Y5 726 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 MIOSQ9NXC5 875 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 SPG21Q9NZD8 308 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 CACNG4Q9UBN1 327 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 CEP83Q9Y592 693 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 CAPN6Q9Y6Q1 641 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 DUSP10Q9Y6W6 482 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 FAM186AA6NE01 2351 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 DMDP11532 3685 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 FNDC1Q4ZHG4 1894 aaPredicted RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 VPS13AQ96RL7 3174 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 GVINP1Q7Z2Y8 2422 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 FAM170AA1A519 330 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 C2orf71A6NGG8 1288 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 BUB1O43683 1085 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 HUS1O60921 280 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 SASH3O75995 380 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 SEC31AO94979 1220 aaKnown RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 ASGR2P07307 311 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 MYBL1P10243 752 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 VDRP11473 427 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 UNGP13051 313 aaPredicted RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 PAX3P23760 479 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 MTHFRP42898 656 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 NOP2P46087 812 aaKnown RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 PLA2G4AP47712 749 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 CLCNKBP51801 687 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 LILRA4P59901 499 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 NOMO3P69849 1222 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 ITIH3Q06033 890 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 TUBB2AQ13885 445 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 WHAMMP3Q1A5X7 153 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 SOWAHAQ2M3V2 549 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 SGO2Q562F6 1265 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 PAPD7Q5XG87 772 aaKnown RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 ACAD10Q6JQN1 1059 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 CC2D1AQ6P1N0 951 aaPredicted RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 UNC93AQ86WB7 457 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 RHOT2Q8IXI1 618 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 SLC39A11Q8N1S5 342 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 GPR161Q8N6U8 529 aaKnown RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 MRPL43Q8N983 215 aaKnown RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 TDRD5Q8NAT2 981 aaKnown RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 TMEM35BQ8NCS4 154 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
CPNE6-218ENST00000560845 OR6B3Q8NGW1 331 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 ZNF606Q8WXB4 792 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 TFAP2BQ92481 460 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 GOLGA1Q92805 767 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 ARHGEF26Q96DR7 871 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 ZSWIM1Q9BR11 485 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 TUBB2BQ9BVA1 445 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 THAP2Q9H0W7 228 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 SNX25Q9H3E2 840 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 GTF3C4Q9UKN8 822 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 PCDHGC3Q9UN70 934 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 L1RE1Q9UN81 338 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 PLXNA3P51805 1871 aa8.53□□□□□ -1.04
CPNE6-218ENST00000560845 A8MXQ7 604 aa8.52□□□□□ -1.05
CPNE6-218ENST00000560845 M0QYV0 167 aa8.52□□□□□ -1.05
CPNE6-218ENST00000560845 O00370 1275 aa8.52□□□□□ -1.05
CPNE6-218ENST00000560845 CYB561D2O14569 222 aa8.52□□□□□ -1.05
CPNE6-218ENST00000560845 CLASP2O75122 1294 aaKnown RBP8.52□□□□□ -1.05
CPNE6-218ENST00000560845 MICAL2O94851 1124 aa8.52□□□□□ -1.05
CPNE6-218ENST00000560845 ATP1A1P05023 1023 aaKnown RBP8.52□□□□□ -1.05
CPNE6-218ENST00000560845 CFHP08603 1231 aa8.52□□□□□ -1.05
CPNE6-218ENST00000560845 ODC1P11926 461 aa8.52□□□□□ -1.05
CPNE6-218ENST00000560845 WARSP23381 471 aaKnown RBP8.52□□□□□ -1.05
CPNE6-218ENST00000560845 CDH5P33151 784 aaPredicted RBP8.52□□□□□ -1.05
CPNE6-218ENST00000560845 AARSP49588 968 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPNE6-218ENST00000560845 GPC5P78333 572 aa8.52□□□□□ -1.05
CPNE6-218ENST00000560845 RNASELQ05823 741 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms