RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 CCDC15Q0P6D6 951 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 CRYMQ14894 314 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 MAPRE1Q15691 268 aaKnown RBP13.11□□□□□ -0.31
SYNM-203ENST00000560674 TFDP3Q5H9I0 405 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 BNC2Q6ZN30 1099 aaPredicted RBP13.11□□□□□ -0.31
SYNM-203ENST00000560674 CHSY1Q86X52 802 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 ATP8B4Q8TF62 1192 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 TUBGCP3Q96CW5 907 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 IL25Q9H293 177 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 IMPAD1Q9NX62 359 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 SOX13Q9UN79 622 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 STRNO43815 780 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 HBP1O60381 514 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 SUPT7LO94864 414 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 IRF1P10914 325 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 TFE3P19532 575 aaPredicted RBP13.11□□□□□ -0.31
SYNM-203ENST00000560674 FUT11Q495W5 492 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 SLC44A4Q53GD3 710 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 UNC45BQ8IWX7 931 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 SPATA16Q9BXB7 569 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 KCTD10Q9H3F6 313 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 ZNRF3Q9ULT6 936 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 RNF103O00237 685 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 RPS6KA5O75582 802 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 GUCA1CO95843 209 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 AVPR1AP37288 418 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 HERVK_113P62684 666 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
SYNM-203ENST00000560674 DCLRE1BQ9H816 532 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 WWOXQ9NZC7 414 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 ZNF70Q9UC06 446 aaPredicted RBP13.11□□□□□ -0.31
SYNM-203ENST00000560674 TRMT6Q9UJA5 497 aaKnown RBP13.11□□□□□ -0.31
SYNM-203ENST00000560674 MSH4O15457 936 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 TIMM44O43615 452 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 CACHD1Q5VU97 1274 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 GIMAP4Q9NUV9 329 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 ERAP1Q9NZ08 941 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 PMPCBO75439 489 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 ZNF23P17027 643 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 LUZP2Q86TE4 346 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 SNRNP27Q8WVK2 155 aaKnown RBP13.11□□□□□ -0.31
SYNM-203ENST00000560674 SH3GL2Q99962 352 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 PACSIN1Q9BY11 444 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 RNF181Q9P0P0 153 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 TAGLN3Q9UI15 199 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 SDR42E2A6NKP2 422 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 TOMM70O94826 608 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 TAF6P49848 677 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 MGAT5BQ3V5L5 792 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 RUVBL2Q9Y230 463 aaKnown RBP13.1□□□□□ -0.31
SYNM-203ENST00000560674 KCNQ2O43526 872 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 NPTXRO95502 500 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 DLGAP3O95886 979 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 TBL3Q12788 808 aaKnown RBP13.1□□□□□ -0.31
SYNM-203ENST00000560674 PDK2Q15119 407 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 MRNIPQ6NTE8 343 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 CCDC103Q8IW40 242 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 PAFAH2Q99487 392 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 CRLS1Q9UJA2 301 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 RASSF9O75901 435 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 PDE5AO76074 875 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 GYS1P13807 737 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 HARS2P49590 506 aaKnown RBP13.1□□□□□ -0.31
SYNM-203ENST00000560674 NOTUMQ6P988 496 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 CINPQ9BW66 212 aaPredicted RBP13.1□□□□□ -0.31
SYNM-203ENST00000560674 HPS4Q9NQG7 708 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 RHBDL2Q9NX52 303 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 STMN3Q9NZ72 180 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 SNX13Q9Y5W8 968 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 M0QYT0 321 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 CYP11B1P15538 503 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 FBXO33Q7Z6M2 555 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 TMEM120AQ9BXJ8 343 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 RNF112Q9ULX5 631 aa13.1□□□□□ -0.31
SYNM-203ENST00000560674 A0A0A6YYK5 440 aaPredicted RBP13.09□□□□□ -0.31
SYNM-203ENST00000560674 KANSL1LA0AUZ9 987 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 STX7O15400 261 aaKnown RBP13.09□□□□□ -0.31
SYNM-203ENST00000560674 AQP5P55064 265 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 NCALDP61601 193 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 HIST2H2ACQ16777 129 aaPredicted RBP13.09□□□□□ -0.31
SYNM-203ENST00000560674 HIST2H2AA3Q6FI13 130 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 FAM151AQ8WW52 585 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 CAVIN3Q969G5 261 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 ZNF333Q96JL9 665 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 ZCCHC18P0CG32 403 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 CHRNB3Q05901 458 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 TP53BP2Q13625 1128 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 TTLL9Q3SXZ7 439 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 SEL1L3Q68CR1 1132 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 GPRASP2Q96D09 838 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 ZFP42Q96MM3 310 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 UBE2OQ9C0C9 1292 aaKnown RBP13.09□□□□□ -0.31
SYNM-203ENST00000560674 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 DNAJC16Q9Y2G8 782 aa13.09□□□□□ -0.31
SYNM-203ENST00000560674 AAR2Q9Y312 384 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms