RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 DCBLD2Q96PD2 775 aa9.99□□□□□ -0.81
SMAD3-215ENST00000560424 FUCA2Q9BTY2 467 aa9.99□□□□□ -0.81
SMAD3-215ENST00000560424 BHMT2Q9H2M3 363 aa9.99□□□□□ -0.81
SMAD3-215ENST00000560424 PLEKHA5Q9HAU0 1116 aa9.99□□□□□ -0.81
SMAD3-215ENST00000560424 DNAAF2Q9NVR5 837 aaKnown RBP9.99□□□□□ -0.81
SMAD3-215ENST00000560424 DSEQ9UL01 958 aa9.99□□□□□ -0.81
SMAD3-215ENST00000560424 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
SMAD3-215ENST00000560424 A0A1B0GVL5 298 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 K7EQS6 105 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 TOM1L1O75674 476 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 ZNF202O95125 648 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 F11P03951 625 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 APODP05090 189 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 HAPLN1P10915 354 aaPredicted RBP9.98□□□□□ -0.81
SMAD3-215ENST00000560424 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 GNSP15586 552 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 PROZP22891 400 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 PAX3P23760 479 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 FXR2P51116 673 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMAD3-215ENST00000560424 CYP4F3Q08477 520 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 KCNB1Q14721 858 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 ZNF77Q15935 545 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 TMEM92Q6UXU6 159 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 DTHD1Q6ZMT9 781 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 DCP1BQ8IZD4 617 aaKnown RBP9.98□□□□□ -0.81
SMAD3-215ENST00000560424 DEFB119Q8N690 84 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 ALLCQ8N6M5 410 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 FRMD1Q8N878 549 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 IGSF22Q8N9C0 903 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 OR10T2Q8NGX3 314 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 PIP4K2CQ8TBX8 421 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 SETD7Q8WTS6 366 aaKnown RBP9.98□□□□□ -0.81
SMAD3-215ENST00000560424 BICD1Q96G01 975 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 CCDC34Q96HJ3 373 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 ZBTB45Q96K62 511 aaPredicted RBP9.98□□□□□ -0.81
SMAD3-215ENST00000560424 CLIC6Q96NY7 704 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 CCSER1Q9C0I3 900 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 ZCWPW1Q9H0M4 648 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 GZF1Q9H116 711 aaPredicted RBP9.98□□□□□ -0.81
SMAD3-215ENST00000560424 TNMDQ9H2S6 317 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 TMEM206Q9H813 350 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 CAPN10Q9HC96 672 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 SUSD2Q9UGT4 822 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 PCDHB5Q9Y5E4 795 aa9.98□□□□□ -0.81
SMAD3-215ENST00000560424 HELZ2Q9BYK8 2649 aaKnown RBP9.98□□□□□ -0.81
SMAD3-215ENST00000560424 SYCE3A1L190 88 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 CLTAP09496 248 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 MUTP22033 750 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 DEKP35659 375 aaKnown RBP9.97□□□□□ -0.81
SMAD3-215ENST00000560424 CCT6AP40227 531 aaKnown RBP9.97□□□□□ -0.81
SMAD3-215ENST00000560424 PDE6CP51160 858 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 LILRA4P59901 499 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 TSPY1Q01534 308 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 GRIN1Q05586 938 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 USP4Q13107 963 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 IL17AQ16552 155 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 MAP7D1Q3KQU3 841 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 SYCP2LQ5T4T6 812 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 LRRC69Q6ZNQ3 347 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 TMEM150AQ86TG1 271 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 SCUBE3Q8IX30 993 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 GALNT15Q8N3T1 639 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 RIN3Q8TB24 985 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 SPATA18Q8TC71 538 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 FAM212AQ96EL1 285 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 RAB34Q9BZG1 259 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 TMEM60Q9H2L4 133 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 FAM124BQ9H5Z6 455 aaPredicted RBP9.97□□□□□ -0.81
SMAD3-215ENST00000560424 ARHGAP28Q9P2N2 729 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 DKK4Q9UBT3 224 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 HOOK1Q9UJC3 728 aaKnown RBP9.97□□□□□ -0.81
SMAD3-215ENST00000560424 RAI2Q9Y5P3 530 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 GON4LQ3T8J9 2241 aa9.97□□□□□ -0.81
SMAD3-215ENST00000560424 URB1O60287 2271 aaKnown RBP9.96□□□□□ -0.81
SMAD3-215ENST00000560424 DENND4CQ5VZ89 1909 aa9.96□□□□□ -0.81
SMAD3-215ENST00000560424 SHROOM3Q8TF72 1996 aa9.96□□□□□ -0.81
SMAD3-215ENST00000560424 A0A087WV48 116 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 VWA3AA6NCI4 1184 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 CAPN8A6NHC0 703 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 SGK1O00141 431 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 ATXN7O15265 892 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-215ENST00000560424 SLC16A4O15374 487 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 HIP1RO75146 1068 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 NDUFS2O75306 463 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 HMGA1P17096 107 aaKnown RBP9.96□□□□□ -0.82
SMAD3-215ENST00000560424 TXLNAP40222 546 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 OPRD1P41143 372 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 GUCY2FP51841 1108 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 SMTNP53814 917 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 RPL10AP62906 217 aaKnown RBP9.96□□□□□ -0.82
SMAD3-215ENST00000560424 KYAT1Q16773 422 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 KRBA2Q6ZNG9 492 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 TMPRSS7Q7RTY8 843 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 TRMT11Q7Z4G4 463 aaKnown RBP9.96□□□□□ -0.82
SMAD3-215ENST00000560424 TMEM130Q8N3G9 435 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 KCTD17Q8N5Z5 321 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 IL17RCQ8NAC3 791 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 SH3RF2Q8TEC5 729 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 CRELD1Q96HD1 420 aa9.96□□□□□ -0.82
SMAD3-215ENST00000560424 HSPA12BQ96MM6 686 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms