RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 CRISPLD1Q9H336 500 aa10.17□□□□□ -0.78
PPP1R3E-204ENST00000559942 POLR1BQ9H9Y6 1135 aa10.17□□□□□ -0.78
PPP1R3E-204ENST00000559942 ASCL3Q9NQ33 180 aa10.17□□□□□ -0.78
PPP1R3E-204ENST00000559942 ANAPC2Q9UJX6 822 aa10.17□□□□□ -0.78
PPP1R3E-204ENST00000559942 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
PPP1R3E-204ENST00000559942 H0Y8X5 98 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 EFSO43281 561 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 SOAT2O75908 522 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 NCAM1P13591 858 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 HOXB4P17483 251 aaPredicted RBP10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 CHMLP26374 656 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 ADD1P35611 737 aaKnown RBP10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 CDR1P51861 262 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 INSM1Q01101 510 aaPredicted RBP10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 IL9RQ01113 521 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 DUSP4Q13115 394 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 MTF1Q14872 753 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 INF2Q27J81 1249 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 DCAF12L1Q5VU92 463 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 ZNF280DQ6N043 979 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 MAEAQ7L5Y9 396 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 ITIH5Q86UX2 942 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 SFTPA1Q8IWL2 248 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 TTC16Q8NEE8 873 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 BICD2Q8TD16 824 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 DYDC2Q96IM9 177 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 UROC1Q96N76 676 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 PPP1R10Q96QC0 940 aaKnown RBP10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 POLR3FQ9H1D9 316 aaPredicted RBP10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 ADAMTS1Q9UHI8 967 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 EIF2B4Q9UI10 523 aaKnown RBP10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 SLC27A5Q9Y2P5 690 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 PPME1Q9Y570 386 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 NUB1Q9Y5A7 615 aa10.16□□□□□ -0.78
PPP1R3E-204ENST00000559942 FN1P02751 2386 aaKnown RBP10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 MYMKA6NI61 221 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 PODXLO00592 558 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 N4BP3O15049 544 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 PAPSS1O43252 624 aaPredicted RBP10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 GJB6O95452 261 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 VNN2O95498 520 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 APODP05090 189 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 CD6P30203 668 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 ARL2P36404 184 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 AFF3P51826 1226 aaKnown RBP10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 SKOR1P84550 965 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 POU5F1BQ06416 359 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 EEF1DP3Q658K8 133 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 TPH2Q8IWU9 490 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 C4orf19Q8IY42 314 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 EFCAB13Q8IY85 973 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 BEST2Q8NFU1 509 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 MIB2Q96AX9 1013 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 ADPGKQ9BRR6 497 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 IL21Q9HBE4 155 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 CD93Q9NPY3 652 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 VPS54Q9P1Q0 977 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 DDX25Q9UHL0 483 aaKnown RBP10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 VAV3Q9UKW4 847 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 ANKRD6Q9Y2G4 727 aa10.15□□□□□ -0.78
PPP1R3E-204ENST00000559942 APCP25054 2843 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 A0A087WWV3 80 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 KLF18A0A0U1RQI7 1052 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 SLC27A2O14975 620 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 SGSM2O43147 1006 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 SLC37A4O43826 429 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 USP12O75317 370 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 KAT7O95251 611 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 RNF224P0DH78 156 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 GSPT1P15170 499 aaKnown RBP10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 CD97P48960 835 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 ST3GAL1Q11201 340 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 USP4Q13107 963 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 CLN3Q13286 438 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 PPP2R5CQ13362 524 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 PRPF4BQ13523 1007 aaKnown RBP10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 ZNF268Q14587 947 aaPredicted RBP10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 NAA30Q147X3 362 aaPredicted RBP10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 TEAD4Q15561 434 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 TBR1Q16650 682 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 NCAPH2Q6IBW4 605 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 GATAD2AQ86YP4 633 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 TTC9BQ8N6N2 239 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 CADM4Q8NFZ8 388 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 C1orf216Q8TAB5 229 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 PIGOQ8TEQ8 1089 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 PNKPQ96T60 521 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 GPR174Q9BXC1 333 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 NFKBIZQ9BYH8 718 aa10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 PRMT7Q9NVM4 692 aaPredicted RBP10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 RBM19Q9Y4C8 960 aaKnown RBP10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 TIMM13Q9Y5L4 95 aaPredicted RBP10.14□□□□□ -0.79
PPP1R3E-204ENST00000559942 DOCK9Q9BZ29 2069 aa10.13□□□□□ -0.79
PPP1R3E-204ENST00000559942 CYP3A7-CYP3A51PA0A087WV96 503 aa10.13□□□□□ -0.79
PPP1R3E-204ENST00000559942 A0A0A0MRY4 1105 aa10.13□□□□□ -0.79
PPP1R3E-204ENST00000559942 SMIM28A0A1B0GU29 152 aa10.13□□□□□ -0.79
PPP1R3E-204ENST00000559942 METTL12A8MUP2 240 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms