RNA–Protein interactions for RNA: ENST00000559833.5

TRIP4-208, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-208ENST00000559833 ITGA11Q9UKX5 1188 aa9.41□□□□□ -0.9
TRIP4-208ENST00000559833 GREB1Q4ZG55 1949 aa9.41□□□□□ -0.9
TRIP4-208ENST00000559833 GOLGA8IPA6NC78 632 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 OTOL1A6NHN0 477 aaPredicted RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 GOLGA8JA6NMD2 632 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 SLC38A8A6NNN8 435 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 SPTLC2O15270 562 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 TGFB1I1O43294 461 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 TADA3O75528 432 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 NOL4O94818 638 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 CSH1P0DML2 217 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 CSH2P0DML3 217 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 IDEP14735 1019 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 CXCL12P48061 93 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 LHX1P48742 406 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 CDR1P51861 262 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 RBP5P82980 135 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 SATB1Q01826 763 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 TNK2Q07912 1038 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 ZNF268Q14587 947 aaPredicted RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 VEPH1Q14D04 833 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 SURF1Q15526 300 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 CFAP221Q4G0U5 840 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 INTS6LQ5JSJ4 861 aaKnown RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 SHC4Q6S5L8 630 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 MON1AQ86VX9 555 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 CCDC65Q8IXS2 484 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 YAF2Q8IY57 180 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 CCDC116Q8IYX3 515 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 SYCP3Q8IZU3 236 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 PDILTQ8N807 584 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 OR5B17Q8NGF7 314 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 KBTBD7Q8WVZ9 684 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 USP13Q92995 863 aaPredicted RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 HPS3Q969F9 1004 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 SNX21Q969T3 373 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 LRRC27Q9C0I9 530 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 GZF1Q9H116 711 aaPredicted RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 HPS4Q9NQG7 708 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 GKN1Q9NS71 199 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 C2orf42Q9NWW7 574 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 DDX43Q9NXZ2 648 aaKnown RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 ABI2Q9NYB9 513 aaPredicted RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 TFIP11Q9UBB9 837 aaKnown RBP9.4□□□□□ -0.9
TRIP4-208ENST00000559833 GTF3C4Q9UKN8 822 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 CCL26Q9Y258 94 aa9.4□□□□□ -0.9
TRIP4-208ENST00000559833 ANAPC1Q9H1A4 1944 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 ZNF233A6NK53 670 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 FIGNL2A6NMB9 653 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 TRDMT1O14717 391 aaKnown RBP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 EIF3DO15371 548 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 HCRTO43612 131 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 CUTAO60888 179 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 HUS1O60921 280 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 PRPF40AO75400 957 aaKnown RBP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 YEATS4O95619 227 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 CST3P01034 146 aaPredicted RBP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 FAM163BP0C2L3 166 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 CYP2F1P24903 491 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 LMO2P25791 158 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 CNR2P34972 360 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 MAGEA11P43364 429 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 GPR15P49685 360 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 KPNA1P52294 538 aaPredicted RBP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 SNRPFP62306 86 aaKnown RBP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 MYL7Q01449 175 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 TSPY1Q01534 308 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 DMWDQ09019 674 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 LRRC32Q14392 662 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 PUM1Q14671 1186 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 PPP2R5DQ14738 602 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 DDR2Q16832 855 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 ITPRIPL2Q3MIP1 535 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 TXNDC8Q6A555 127 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 CBWD2Q8IUF1 395 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 MAB21L3Q8N8X9 362 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 FAM200AQ8TCP9 573 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 TMEM174Q8WUU8 243 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 FUBP3Q96I24 572 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 CEP295NLQ96MC4 621 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 PI4K2AQ9BTU6 479 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 MTMR12Q9C0I1 747 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 SMG9Q9H0W8 520 aaKnown RBP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 KIAA1586Q9HCI6 787 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 PARD6AQ9NPB6 346 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 RBM12Q9NTZ6 932 aaKnown RBP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 TDP1Q9NUW8 608 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 HSPBP1Q9NZL4 362 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 SMG5Q9UPR3 1016 aaKnown RBP9.39□□□□□ -0.91
TRIP4-208ENST00000559833 NME7Q9Y5B8 376 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 SNX9Q9Y5X1 595 aa9.39□□□□□ -0.91
TRIP4-208ENST00000559833 SLC35F4A4IF30 521 aa9.38□□□□□ -0.91
TRIP4-208ENST00000559833 ATP2C2O75185 946 aa9.38□□□□□ -0.91
TRIP4-208ENST00000559833 PDIA4P13667 645 aaKnown RBP9.38□□□□□ -0.91
TRIP4-208ENST00000559833 TCF3P15923 654 aa9.38□□□□□ -0.91
TRIP4-208ENST00000559833 ACAT1P24752 427 aaKnown RBP9.38□□□□□ -0.91
TRIP4-208ENST00000559833 HOXC13P31276 330 aa9.38□□□□□ -0.91
TRIP4-208ENST00000559833 RPL10AP62906 217 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms