RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 E5RJQ4 531 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 GPR32O75388 356 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 KIAA0754O94854 1291 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 TRUB2O95900 331 aaKnown RBP11.6□□□□□ -0.55
SPG11-217ENST00000559511 IFNAR2P48551 515 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 MYO1EQ12965 1108 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 MORF4L2Q15014 288 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 FAM183BPQ6ZVS7 135 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 OTUD6BQ8N6M0 293 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 CMASQ8NFW8 434 aaPredicted RBP11.6□□□□□ -0.55
SPG11-217ENST00000559511 HSPH1Q92598 858 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 PRCCQ92733 491 aaPredicted RBP11.6□□□□□ -0.55
SPG11-217ENST00000559511 FOXP3Q9BZS1 431 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 SNTG2Q9NY99 539 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 EURLQ9NYK6 297 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 TBK1Q9UHD2 729 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 LGALS13Q9UHV8 139 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 USP18Q9UMW8 372 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 NME7Q9Y5B8 376 aa11.6□□□□□ -0.55
SPG11-217ENST00000559511 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.6□□□□□ -0.55
SPG11-217ENST00000559511 MBLAC1A4D2B0 266 aaPredicted RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 HAS3O00219 553 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 CTGFP29279 349 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 RGS2P41220 211 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 ZNF143P52747 638 aaPredicted RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 INHBEP58166 350 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 CRHR2Q13324 411 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 MFSD10Q14728 455 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 LRRC14Q15048 493 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 GKAP1Q5VSY0 366 aaPredicted RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 LCLAT1Q6UWP7 414 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 CYP4V2Q6ZWL3 525 aaPredicted RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 NT5DC4Q86YG4 428 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 LRRC34Q8IZ02 419 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 CACNA2D3Q8IZS8 1091 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 KCTD6Q8NC69 237 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 MGARPQ8TDB4 240 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 PPM1EQ8WY54 764 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 MRPL45Q9BRJ2 306 aaKnown RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 NT5C1AQ9BXI3 368 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 EIF2AQ9BY44 585 aaKnown RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 TUBGCP4Q9UGJ1 667 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 NAALADL1Q9UQQ1 740 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 HES2Q9Y543 173 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 SMIM35A0A1B0GVV1 85 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 C2CD4BA6NLJ0 364 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 CDH16O75309 829 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 BANF1O75531 89 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 GRAP2O75791 330 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 ABHD2P08910 425 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 GCAP28676 217 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 ATP5DP30049 168 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 RGS7P49802 495 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 PSEN2P49810 448 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 ADAM17P78536 824 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 BEX3Q00994 111 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 GAD2Q05329 585 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 MMRN1Q13201 1228 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 MPP2Q14168 576 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 STAT4Q14765 748 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 C15orf59Q2T9L4 293 aaPredicted RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 GOLGA7BQ2TAP0 167 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 DCAF4L1Q3SXM0 396 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 PPP1R26Q5T8A7 1209 aaPredicted RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 RNF187Q5TA31 235 aaPredicted RBP11.59□□□□□ -0.55
SPG11-217ENST00000559511 RFX6Q8HWS3 928 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 APBA2Q99767 749 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 ZFYVE28Q9HCC9 887 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 RNF19AQ9NV58 838 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 SHOC2Q9UQ13 582 aa11.59□□□□□ -0.55
SPG11-217ENST00000559511 GOLGA8MH3BSY2 632 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 TNPO2O14787 897 aaKnown RBP11.58□□□□□ -0.56
SPG11-217ENST00000559511 RNF8O76064 485 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 CYP2C9P11712 490 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 GPD1P21695 349 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 ACAP1Q15027 740 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 SPRED3Q2MJR0 410 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 GLRA4Q5JXX5 417 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 ANKRD22Q5VYY1 191 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 OR6B2Q6IFH4 312 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 CEP128Q6ZU80 1094 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 ACOT1Q86TX2 421 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 RXFP2Q8WXD0 754 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 SOCS4Q8WXH5 440 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 C18orf25Q96B23 403 aaPredicted RBP11.58□□□□□ -0.56
SPG11-217ENST00000559511 CABS1Q96KC9 395 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 SNX27Q96L92 541 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 OSMRQ99650 979 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 CALN1Q9BXU9 219 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 GCOM2Q9BZD3 368 aaPredicted RBP11.58□□□□□ -0.56
SPG11-217ENST00000559511 MLXIPLQ9NP71 852 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 ASNSD1Q9NWL6 643 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 SNX9Q9Y5X1 595 aa11.58□□□□□ -0.56
SPG11-217ENST00000559511 CPP00450 1065 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 MYL3P08590 195 aa11.57□□□□□ -0.56
SPG11-217ENST00000559511 BRAFP15056 766 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms