RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ECT2Q9H8V3 914 aa15.94■□□□□ 0.14
LRRC28-213ENST00000559399 SLC8A2Q9UPR5 921 aa15.94■□□□□ 0.14
LRRC28-213ENST00000559399 CACNA1AO00555 2505 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 F8VP50 259 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 RNF40O75150 1001 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 PHACTR2O75167 634 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 STAU1O95793 577 aaKnown RBP15.93■□□□□ 0.14
LRRC28-213ENST00000559399 TCF3P15923 654 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 ATICP31939 592 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 USP46P62068 366 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 NOP14P78316 857 aaKnown RBP15.93■□□□□ 0.14
LRRC28-213ENST00000559399 EML3Q32P44 896 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 FBXO43Q4G163 708 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 SYAP1Q96A49 352 aaPredicted RBP15.93■□□□□ 0.14
LRRC28-213ENST00000559399 C8orf48Q96LL4 319 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 TTLL2Q9BWV7 592 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 ELOVL4Q9GZR5 314 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 GZF1Q9H116 711 aaPredicted RBP15.93■□□□□ 0.14
LRRC28-213ENST00000559399 FBRSL1Q9HCM7 1045 aaKnown RBP15.93■□□□□ 0.14
LRRC28-213ENST00000559399 TRPM5Q9NZQ8 1165 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 NME7Q9Y5B8 376 aa15.93■□□□□ 0.14
LRRC28-213ENST00000559399 NUP210Q8TEM1 1887 aaPredicted RBP15.93■□□□□ 0.14
LRRC28-213ENST00000559399 CCDC163A0A0D9SF12 145 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 SLFN14P0C7P3 912 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 PTPN1P18031 435 aaKnown RBP15.92■□□□□ 0.14
LRRC28-213ENST00000559399 HOXC13P31276 330 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 PPP3CCP48454 512 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 GALK1P51570 392 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 ATXN1P54253 815 aaKnown RBP15.92■□□□□ 0.14
LRRC28-213ENST00000559399 MYL6P60660 151 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 DNM1Q05193 864 aaKnown RBP15.92■□□□□ 0.14
LRRC28-213ENST00000559399 BIRC3Q13489 604 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 PKP1Q13835 747 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 NAIF1Q69YI7 327 aaPredicted RBP15.92■□□□□ 0.14
LRRC28-213ENST00000559399 GRAMD1CQ8IYS0 662 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 FAM160A2Q8N612 972 aaPredicted RBP15.92■□□□□ 0.14
LRRC28-213ENST00000559399 ZNF516Q92618 1163 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 CD101Q93033 1021 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 ZNF518BQ9C0D4 1074 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 XYLT2Q9H1B5 865 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 DPEP3Q9H4B8 488 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 SEMA4GQ9NTN9 838 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 EXOC1Q9NV70 894 aa15.92■□□□□ 0.14
LRRC28-213ENST00000559399 NXF1Q9UBU9 619 aaKnown RBP15.92■□□□□ 0.14
LRRC28-213ENST00000559399 DNAH14Q0VDD8 3507 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 ZNF840PA6NDX5 716 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 A8MXQ7 604 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 RPP40O75818 363 aaKnown RBP15.91■□□□□ 0.14
LRRC28-213ENST00000559399 CLSTN1O94985 981 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 NFATC1O95644 943 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 PXNP49023 591 aaPredicted RBP15.91■□□□□ 0.14
LRRC28-213ENST00000559399 CASP4P49662 377 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 AP3M2P53677 418 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 NR1H3Q13133 447 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 CSRP2Q16527 193 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 B3GALNT2Q8NCR0 500 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 GAB3Q8WWW8 586 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 RTKNQ9BST9 563 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 VRTNQ9H8Y1 702 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 SERTAD1Q9UHV2 236 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 RCOR1Q9UKL0 485 aa15.91■□□□□ 0.14
LRRC28-213ENST00000559399 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.91■□□□□ 0.14
LRRC28-213ENST00000559399 LEFTY2O00292 366 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 ACTN4O43707 911 aaKnown RBP15.9■□□□□ 0.14
LRRC28-213ENST00000559399 FOXD2O60548 495 aaPredicted RBP15.9■□□□□ 0.14
LRRC28-213ENST00000559399 OLFM2O95897 454 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 CACNA2D1P54289 1103 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 SLC7A9P82251 487 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 STK4Q13043 487 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 ZNF699Q32M78 642 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 TDRD10Q5VZ19 366 aaKnown RBP15.9■□□□□ 0.14
LRRC28-213ENST00000559399 PRR23CQ6ZRP0 262 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 CAMKK1Q8N5S9 505 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 KIAA1958Q8N8K9 716 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 KIAA0895Q8NCT3 520 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 RPLP0P6Q8NHW5 317 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 PLEKHO2Q8TD55 490 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 NETO1Q8TDF5 533 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 ACDQ96AP0 544 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 PAGE5Q96GU1 130 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 SMYD3Q9H7B4 428 aa15.9■□□□□ 0.14
LRRC28-213ENST00000559399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.89■□□□□ 0.13
LRRC28-213ENST00000559399 LRRIQ3A6PVS8 624 aaPredicted RBP15.89■□□□□ 0.13
LRRC28-213ENST00000559399 CLDN5O00501 218 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 KLRC4O43908 158 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 AKAP3O75969 853 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 ABL1P00519 1130 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 CCDC192P0DO97 292 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 CLDN10P78369 228 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 ZXDBP98169 803 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 IFRD2Q12894 506 aaPredicted RBP15.89■□□□□ 0.13
LRRC28-213ENST00000559399 TAF10Q12962 218 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 NCOA4Q13772 614 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 ZNF667Q5HYK9 610 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 SYT13Q7L8C5 426 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 CACNA2D4Q7Z3S7 1137 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 SLC9A9Q8IVB4 645 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 CCDC26Q8TAB7 109 aa15.89■□□□□ 0.13
LRRC28-213ENST00000559399 PARD3BQ8TEW8 1205 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms