RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 PRKCIP41743 596 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 CCT4P50991 539 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 CDK17Q00537 523 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 GUCY1A3Q02108 690 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 RELQ04864 619 aaPredicted RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TFCP2Q12800 502 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 MAP4K2Q12851 820 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 SLC35G1Q2M3R5 365 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ZNF600Q6ZNG1 722 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 BICDL1Q6ZP65 573 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 IKBIPQ70UQ0 350 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 DHX32Q7L7V1 743 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 HERVK_113Q902F9 699 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 UHRF1Q96T88 793 aaPredicted RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 THUMPD3Q9BV44 507 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 USP44Q9H0E7 712 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 SNX15Q9NRS6 342 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TUBD1Q9UJT1 453 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ASB3Q9Y575 518 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 NR2E3Q9Y5X4 410 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TACC3Q9Y6A5 838 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ECM29Q5VYK3 1845 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 A4D1N5 150 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 HRGP04196 525 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 LTA4HP09960 611 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 MYL6P60660 151 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TPM4P67936 248 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 CUL3Q13618 768 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ITGA7Q13683 1181 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 RCN2Q14257 317 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 VEPH1Q14D04 833 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 PCSK7Q16549 785 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 AADACL4Q5VUY2 407 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 KLHDC10Q6PID8 442 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 CRELD2Q6UXH1 353 aaPredicted RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ZYG11AQ6WRX3 759 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 KIF6Q6ZMV9 814 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 KIAA0319LQ8IZA0 1049 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 SFRP1Q8N474 314 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 SUCLG2Q96I99 432 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TM9SF2Q99805 663 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 SLC39A10Q9ULF5 831 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TNRC6CQ9HCJ0 1690 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 H0YCG3 227 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 H3BML4 177 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 K7ESF4 209 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TBC1D4O60343 1298 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ZC3H11AO75152 810 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ULK1O75385 1050 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TSPAN9O75954 239 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 SEC31AO94979 1220 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ALADP13716 330 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 PRG2P13727 222 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 NNMTP40261 264 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 GRIA4P48058 902 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ETV1P50549 477 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 CARD18P57730 90 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 CHAF1BQ13112 559 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 SNAPC2Q13487 334 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 AUHQ13825 339 aaKnown RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 BTG3Q14201 252 aaPredicted RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 STK11Q15831 433 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ANO6Q4KMQ2 910 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 C1orf185Q5T7R7 199 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 NBPF12Q5TAG4 269 aaPredicted RBP6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TPGS2Q68CL5 300 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 CABP7Q86V35 215 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 KRT78Q8N1N4 520 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 ETNPPLQ8TBG4 499 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TCF12Q99081 682 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 SIKE1Q9BRV8 207 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 BRIP1Q9BX63 1249 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 MMRN2Q9H8L6 949 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 PDE11AQ9HCR9 933 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 PPM1HQ9ULR3 514 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 TRAF3IP3Q9Y228 551 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 COL4A1P02462 1669 aa6.08□□□□□ -1.44
CTDSPL2-206ENST00000559175 NCF1BA6NI72 391 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 NCF1CA8MVU1 366 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 HNRNPCL2B2RXH8 293 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 HNRNPCL1O60812 293 aaKnown RBP6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 PRAMEF12O95522 483 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 PLCG2P16885 1265 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 NFKBIAP25963 317 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 ADCY8P40145 1251 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 FAM189BP81408 668 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 ITGB3BPQ13352 177 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 DPYSQ14117 519 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 C15orf59Q2T9L4 293 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 ZNF792Q3KQV3 632 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 MCMDC2Q4G0Z9 681 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 THEMIS2Q5TEJ8 643 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 ADAT2Q7Z6V5 191 aaKnown RBP6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 ITPRIPQ8IWB1 547 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 CDH26Q8IXH8 852 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 ZFAND2BQ8WV99 257 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 RFFLQ8WZ73 363 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 ARHGAP45Q92619 1136 aa6.07□□□□□ -1.44
CTDSPL2-206ENST00000559175 NECAB3Q96P71 396 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms