RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 USP17L7P0C7H9 530 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 HLA-EP13747 358 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 EVCP57679 992 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 BYSLQ13895 437 aaKnown RBP12.82□□□□□ -0.36
SMAD3-206ENST00000558739 SLC36A4Q6YBV0 504 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 GPR155Q7Z3F1 870 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 FILIP1Q7Z7B0 1213 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 PHTF2Q8N3S3 785 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 GALNT15Q8N3T1 639 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 RHBDD1Q8TEB9 315 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 NAP1L4Q99733 375 aaKnown RBP12.82□□□□□ -0.36
SMAD3-206ENST00000558739 TMEM206Q9H813 350 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 CD248Q9HCU0 757 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 TUFT1Q9NNX1 390 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 TM7SF3Q9NS93 570 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 LRBAP50851 2863 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 CPLX1O14810 134 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 TRIM24O15164 1050 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 SLC16A4O15374 487 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 CXADRP78310 365 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 RESTQ13127 1097 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 LY6DQ14210 128 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 DHCR24Q15392 516 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 PTPRNQ16849 979 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 WSCD1Q658N2 575 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 SPATA18Q8TC71 538 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 SPPL2BQ8TCT7 592 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 KIFAP3Q92845 792 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 ZNF419Q96HQ0 510 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-206ENST00000558739 PNKPQ96T60 521 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 ARID3AQ99856 593 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 BHMT2Q9H2M3 363 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 ARHGEF4Q9NR80 690 aa12.81□□□□□ -0.36
SMAD3-206ENST00000558739 UBQLN1Q9UMX0 589 aaKnown RBP12.81□□□□□ -0.36
SMAD3-206ENST00000558739 MYH11P35749 1972 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 TEX51A0A1B0GUA7 166 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 LACTBL1A8MY62 500 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 LEFTY2O00292 366 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
SMAD3-206ENST00000558739 NOL4O94818 638 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 WISP1O95388 367 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 APODP05090 189 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 CYP11A1P05108 521 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 HOXB2P14652 356 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 ATP2C1P98194 919 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-206ENST00000558739 TLE3Q04726 772 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 MAPK7Q13164 816 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 KCNB1Q14721 858 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 ENOX2Q16206 610 aaKnown RBP12.8□□□□□ -0.36
SMAD3-206ENST00000558739 HLA-BQ31612 363 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 TAF1BQ53T94 588 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-206ENST00000558739 RHBDF2Q6PJF5 856 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 KCNB2Q92953 911 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 NXPE2Q96DL1 559 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 ACOX2Q99424 681 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 TRIM4Q9C037 500 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 GMIPQ9P107 970 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 ARHGAP26Q9UNA1 814 aa12.8□□□□□ -0.36
SMAD3-206ENST00000558739 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-206ENST00000558739 ITPR3Q14573 2671 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 MYMKA6NI61 221 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 TRIM66O15016 1216 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 FAM189A1O60320 539 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 HIP1RO75146 1068 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 TOM1L1O75674 476 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 NFICP08651 508 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 CSH1P0DML2 217 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 CSH2P0DML3 217 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 CYP3A5P20815 502 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 CYP2F1P24903 491 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 GRIA2P42262 883 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 CCDC173Q0VFZ6 552 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 HSF5Q4G112 596 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-206ENST00000558739 C9orf57Q5W0N0 161 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 LRRC69Q6ZNQ3 347 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 ZNF513Q8N8E2 541 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-206ENST00000558739 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
SMAD3-206ENST00000558739 PYM1Q9BRP8 204 aaKnown RBP12.79□□□□□ -0.36
SMAD3-206ENST00000558739 RUSC1Q9BVN2 902 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 MIR1-1HGQ9H1L0 117 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 FAM124BQ9H5Z6 455 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-206ENST00000558739 TMEM134Q9H6X4 195 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 KMT5AQ9NQR1 393 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 SMPD4Q9NXE4 827 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 SUSD2Q9UGT4 822 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 RAD54BQ9Y620 910 aa12.79□□□□□ -0.36
SMAD3-206ENST00000558739 SFI1A8K8P3 1242 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 CBX4O00257 560 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 CYB561D2O14569 222 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 FLRT2O43155 660 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 HCRTO43612 131 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 SLC28A2O43868 658 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 HDCP19113 662 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 MATKP42679 507 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 PPP2R3AQ06190 1150 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 MCL1Q07820 350 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 EGFLAMQ63HQ2 1017 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 JADE1Q6IE81 842 aa12.78□□□□□ -0.36
SMAD3-206ENST00000558739 LAYNQ6UX15 382 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms