RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 DUSP16Q9BY84 665 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 DNAI2Q9GZS0 605 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 PDCL3Q9H2J4 239 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 PRDM6Q9NQX0 595 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 THEGQ9P2T0 379 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 IMPACTQ9P2X3 320 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 HESX1Q9UBX0 185 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 TJP2Q9UDY2 1190 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 CDH22Q9UJ99 828 aa12.48□□□□□ -0.41
CCDC33-204ENST00000558645 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 NUP210Q8TEM1 1887 aaPredicted RBP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 TMCO5BA8MYB1 307 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 HHLA1C9JL84 531 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 TBX10O75333 385 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 GABBR2O75899 941 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 NPR3P17342 541 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 TNFAIP3P21580 790 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 HNRNPH3P31942 346 aaKnown RBP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 EIF4A3P38919 411 aaKnown RBP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 PRKCIP41743 596 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 BCAT1P54687 386 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 USP46P62068 366 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 DLX2Q07687 328 aaPredicted RBP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 BST2Q10589 180 aaKnown RBP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 SMARCB1Q12824 385 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 C2CD6Q53TS8 623 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 PPM1LQ5SGD2 360 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 LIN9Q5TKA1 542 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 NAA35Q5VZE5 725 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 PMF1Q6P1K2 205 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 WDTC1Q8N5D0 677 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 EFHBQ8N7U6 833 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 SLC30A5Q8TAD4 765 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 CPA5Q8WXQ8 436 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 FUBP3Q96I24 572 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 ASB2Q96Q27 587 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 NUCKS1Q9H1E3 243 aaKnown RBP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 ABCB6Q9NP58 842 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 DMAP1Q9NPF5 467 aaPredicted RBP12.47□□□□□ -0.41
CCDC33-204ENST00000558645 CLDND1Q9NY35 253 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 TAS2R14Q9NYV8 317 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 PCDHGC3Q9UN70 934 aa12.47□□□□□ -0.41
CCDC33-204ENST00000558645 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 CCDC172P0C7W6 258 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 ANXA13P27216 316 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 GPD2P43304 727 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 MAGEA11P43364 429 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 MRPS5P82675 430 aaKnown RBP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 ADAM15Q13444 863 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 STILQ15468 1287 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 CLUL1Q15846 466 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 MEA1Q16626 185 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 RARS2Q5T160 578 aaKnown RBP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 VSTM1Q6UX27 236 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 TMC5Q6UXY8 1006 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 CCDC149Q6ZUS6 474 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 PIGZQ86VD9 579 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 SCAMP5Q8TAC9 235 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 NDRG1Q92597 394 aaKnown RBP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 ANP32BQ92688 251 aaKnown RBP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 CDCA3Q99618 268 aaPredicted RBP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 HCFC1R1Q9NWW0 138 aa12.46□□□□□ -0.41
CCDC33-204ENST00000558645 MAGED2Q9UNF1 606 aaPredicted RBP12.46□□□□□ -0.41
CCDC33-204ENST00000558645 KIF26AQ9ULI4 1882 aaPredicted RBP12.45□□□□□ -0.42
CCDC33-204ENST00000558645 SOWAHDA6NJG2 315 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 SLC38A8A6NNN8 435 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 GOLGA6L6A8MZA4 724 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 NRG2O14511 850 aaPredicted RBP12.45□□□□□ -0.42
CCDC33-204ENST00000558645 XPO1O14980 1071 aaKnown RBP12.45□□□□□ -0.42
CCDC33-204ENST00000558645 TRIM66O15016 1216 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 ZMYND10O75800 440 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 LRG1P02750 347 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 CYP1A1P04798 512 aaPredicted RBP12.45□□□□□ -0.42
CCDC33-204ENST00000558645 LCP1P13796 627 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 LTBRP36941 435 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 ALDH1A3P47895 512 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 TUFMP49411 452 aaKnown RBP12.45□□□□□ -0.42
CCDC33-204ENST00000558645 SLC5A3P53794 718 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 NOMO3P69849 1222 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 GFPT1Q06210 699 aaPredicted RBP12.45□□□□□ -0.42
CCDC33-204ENST00000558645 PLD1Q13393 1074 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 MTF1Q14872 753 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 CLEC16AQ2KHT3 1053 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 CYP4A22Q5TCH4 519 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 ANKRD54Q6NXT1 300 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 SYCE2Q6PIF2 218 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 PHLDB2Q86SQ0 1253 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 ZNF677Q86XU0 584 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 TMEM139Q8IV31 216 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 CLEC4CQ8WTT0 213 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 SLC35F5Q8WV83 523 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 CASP10Q92851 521 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 PDLIM2Q96JY6 352 aa12.45□□□□□ -0.42
CCDC33-204ENST00000558645 C8orf48Q96LL4 319 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms