RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ASAH2Q9NR71 780 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 HESX1Q9UBX0 185 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 MAGED2Q9UNF1 606 aaPredicted RBP18.47■□□□□ 0.55
TPM1-214ENST00000558544 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.47■□□□□ 0.55
TPM1-214ENST00000558544 CLUHO75153 1309 aa18.47■□□□□ 0.55
TPM1-214ENST00000558544 GFPT2O94808 682 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 MICAL2O94851 1124 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 RHOP08100 348 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 SOX5P35711 763 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 PTK2Q05397 1052 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 IFRD2Q12894 506 aaPredicted RBP18.46■□□□□ 0.55
TPM1-214ENST00000558544 PUS10Q3MIT2 529 aaKnown RBP18.46■□□□□ 0.55
TPM1-214ENST00000558544 LCLAT1Q6UWP7 414 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 TMC8Q8IU68 726 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 ANKRD52Q8NB46 1076 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 NECTIN4Q96NY8 510 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 TRIM5Q9C035 493 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 TTYH3Q9C0H2 523 aa18.46■□□□□ 0.55
TPM1-214ENST00000558544 ZNF334Q9HCZ1 680 aaPredicted RBP18.46■□□□□ 0.55
TPM1-214ENST00000558544 WDR6Q9NNW5 1121 aaKnown RBP18.46■□□□□ 0.55
TPM1-214ENST00000558544 M0QYV0 167 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 CSH1P0DML2 217 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 CSH2P0DML3 217 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 MYL4P12829 197 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 HMGA1P17096 107 aaKnown RBP18.45■□□□□ 0.54
TPM1-214ENST00000558544 STAT1P42224 750 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 BCAT1P54687 386 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 MRPS5P82675 430 aaKnown RBP18.45■□□□□ 0.54
TPM1-214ENST00000558544 STILQ15468 1287 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 SMAD2Q15796 467 aaKnown RBP18.45■□□□□ 0.54
TPM1-214ENST00000558544 CNGA2Q16280 664 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 SMYD5Q6GMV2 418 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 DENND5BQ6ZUT9 1274 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 PDZD4Q76G19 769 aaPredicted RBP18.45■□□□□ 0.54
TPM1-214ENST00000558544 UBA3Q8TBC4 463 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 ATXN2LQ8WWM7 1075 aaKnown RBP18.45■□□□□ 0.54
TPM1-214ENST00000558544 ZNF606Q8WXB4 792 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 LRRC3Q9BY71 257 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 FAM50BQ9Y247 325 aa18.45■□□□□ 0.54
TPM1-214ENST00000558544 MED7O43513 233 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 CCR2P41597 374 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 SLC5A3P53794 718 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 USP46P62068 366 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 PDE4CQ08493 712 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 BST2Q10589 180 aaKnown RBP18.44■□□□□ 0.54
TPM1-214ENST00000558544 SLC5A9Q2M3M2 681 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 FIGNQ5HY92 759 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 ITIH6Q6UXX5 1313 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 GET4Q7L5D6 327 aaPredicted RBP18.44■□□□□ 0.54
TPM1-214ENST00000558544 NUP93Q8N1F7 819 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 NUP210Q8TEM1 1887 aaPredicted RBP18.44■□□□□ 0.54
TPM1-214ENST00000558544 BAP1Q92560 729 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 CEP295NLQ96MC4 621 aa18.44■□□□□ 0.54
TPM1-214ENST00000558544 LRRC53A6NM62 1247 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 HHLA1C9JL84 531 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 TULP2O00295 520 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 NRG2O14511 850 aaPredicted RBP18.43■□□□□ 0.54
TPM1-214ENST00000558544 TNFRSF10BO14763 440 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 CFHP08603 1231 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 CYP11B1P15538 503 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 SP100P23497 879 aaPredicted RBP18.43■□□□□ 0.54
TPM1-214ENST00000558544 FSHRP23945 695 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 GABRR2P28476 465 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 PDE6CP51160 858 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 EPHA5P54756 1037 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 SLC8A3P57103 927 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 BPIFB4P59827 614 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 PKDCCQ504Y2 493 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 PRSS36Q5K4E3 855 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 CYP4A22Q5TCH4 519 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 GPRIN1Q7Z2K8 1008 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 VSTM4Q8IW00 320 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 LEMD2Q8NC56 503 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 ITFG1Q8TB96 612 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 SECISBP2LQ93073 1101 aaKnown RBP18.43■□□□□ 0.54
TPM1-214ENST00000558544 TCEAL4Q96EI5 215 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 NUP58Q9BVL2 599 aa18.43■□□□□ 0.54
TPM1-214ENST00000558544 AVENQ9NQS1 362 aaPredicted RBP18.43■□□□□ 0.54
TPM1-214ENST00000558544 MRPS23Q9Y3D9 190 aaKnown RBP18.43■□□□□ 0.54
TPM1-214ENST00000558544 HELZP42694 1942 aaKnown RBP18.43■□□□□ 0.54
TPM1-214ENST00000558544 XPO1O14980 1071 aaKnown RBP18.42■□□□□ 0.54
TPM1-214ENST00000558544 SETSIPP0DME0 302 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 GJA1P17302 382 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 ARID5AQ03989 594 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 TAF3Q5VWG9 929 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 DENND1BQ6P3S1 775 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 NOP9Q86U38 636 aaKnown RBP18.42■□□□□ 0.54
TPM1-214ENST00000558544 PIGZQ86VD9 579 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 PASD1Q8IV76 773 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.42■□□□□ 0.54
TPM1-214ENST00000558544 SCAMP5Q8TAC9 235 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 EPS8L1Q8TE68 723 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 ING5Q8WYH8 240 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 TRMT2BQ96GJ1 504 aaKnown RBP18.42■□□□□ 0.54
TPM1-214ENST00000558544 MYRFLQ96LU7 910 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 ASB2Q96Q27 587 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 IL21Q9HBE4 155 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 PNPLA8Q9NP80 782 aa18.42■□□□□ 0.54
TPM1-214ENST00000558544 UXTQ9UBK9 157 aaPredicted RBP18.42■□□□□ 0.54
TPM1-214ENST00000558544 A0A1W2PRU2 124 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms