RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PARVAQ9NVD7 372 aa15.7■□□□□ 0.1
VPS18-202ENST00000558474 CNOT8Q9UFF9 292 aaKnown RBP15.7■□□□□ 0.1
VPS18-202ENST00000558474 AFF4Q9UHB7 1163 aaKnown RBP15.7■□□□□ 0.1
VPS18-202ENST00000558474 MTMR11A4FU01 709 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 USP27XA6NNY8 438 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 GRXCR1A8MXD5 290 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 CLDN5O00501 218 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 FBXO21O94952 628 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 ABCB4P21439 1286 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 BDNFP23560 247 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 SSTR3P32745 418 aaPredicted RBP15.69■□□□□ 0.1
VPS18-202ENST00000558474 OR1D2P34982 312 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 TUFMP49411 452 aaKnown RBP15.69■□□□□ 0.1
VPS18-202ENST00000558474 ROR1Q01973 937 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 SMC1AQ14683 1233 aaKnown RBP15.69■□□□□ 0.1
VPS18-202ENST00000558474 PTPN14Q15678 1187 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 RAB41Q5JT25 222 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 FAM109BQ6ICB4 259 aaPredicted RBP15.69■□□□□ 0.1
VPS18-202ENST00000558474 RSPO2Q6UXX9 243 aaPredicted RBP15.69■□□□□ 0.1
VPS18-202ENST00000558474 PIGZQ86VD9 579 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 SMOQ99835 787 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 C17orf80Q9BSJ5 609 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 EMILIN2Q9BXX0 1053 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 PBX4Q9BYU1 374 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 LMAN2LQ9H0V9 348 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 TLR9Q9NR96 1032 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 COMMD8Q9NX08 183 aa15.69■□□□□ 0.1
VPS18-202ENST00000558474 A0A1W2PPC1 479 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 TCRBV5S1A1TA0A578 114 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 WDR27A2RRH5 827 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 H3BNC9 293 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 SART1O43290 800 aaKnown RBP15.68■□□□□ 0.1
VPS18-202ENST00000558474 KIF5CO60282 957 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 OR4Q2P0C623 313 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 ATF2P15336 505 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 RRM1P23921 792 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 MAP3K7CLP57077 242 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 RPL10AP62906 217 aaKnown RBP15.68■□□□□ 0.1
VPS18-202ENST00000558474 SMAD3P84022 425 aaKnown RBP15.68■□□□□ 0.1
VPS18-202ENST00000558474 NYAP1Q6ZVC0 841 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 RTL10Q7L3V2 364 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 ARCQ7LC44 396 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 TMC7Q7Z402 723 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 XYLT1Q86Y38 959 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 ZMIZ2Q8NF64 920 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 TRIM58Q8NG06 486 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 SLC35G2Q8TBE7 412 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 POF1BQ8WVV4 589 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 MCRS1Q96EZ8 462 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 SPATA17Q96L03 361 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 PRO3102Q9H379 93 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 LRRC4Q9HBW1 653 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 CNGB3Q9NQW8 809 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 ST7Q9NRC1 585 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 ABI2Q9NYB9 513 aaPredicted RBP15.68■□□□□ 0.1
VPS18-202ENST00000558474 CTTNBP2NLQ9P2B4 639 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 GUCA1BQ9UMX6 200 aa15.68■□□□□ 0.1
VPS18-202ENST00000558474 YBX2Q9Y2T7 364 aaKnown RBP15.68■□□□□ 0.1
VPS18-202ENST00000558474 SIGLEC16A6NMB1 481 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 HHLA1C9JL84 531 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 E5RJQ4 531 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 C2CD2LO14523 706 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 FSCN2O14926 492 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 LPXNO60711 386 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 BEST1O76090 585 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 CXCL14O95715 111 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 ERBB2P04626 1255 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 ADH1AP07327 375 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 GLI1P08151 1106 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 HAPLN1P10915 354 aaPredicted RBP15.67■□□□□ 0.1
VPS18-202ENST00000558474 MYOGP15173 224 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 GRIK1P39086 918 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 MAMLD1Q13495 774 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 CCDC142Q17RM4 750 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 DNAJC24Q6P3W2 148 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 RNF19BQ6ZMZ0 732 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 SYCE1Q8N0S2 351 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 MRPL43Q8N983 215 aaKnown RBP15.67■□□□□ 0.1
VPS18-202ENST00000558474 ARHGEF26Q96DR7 871 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 ALS2CR12Q96Q35 445 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 TCF25Q9BQ70 676 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 NUP85Q9BW27 656 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 ASNSD1Q9NWL6 643 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 PCDHGC5Q9Y5F6 944 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 DUSP10Q9Y6W6 482 aa15.67■□□□□ 0.1
VPS18-202ENST00000558474 TULP2O00295 520 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 CYP2F1P24903 491 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 NOP2P46087 812 aaKnown RBP15.66■□□□□ 0.1
VPS18-202ENST00000558474 ARPP19P56211 112 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 SLC6A3Q01959 620 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 EFHC1Q5JVL4 640 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 PPP1R15BQ5SWA1 713 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 TCEAL8Q8IYN2 117 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 SIX6OS1Q8N1H7 587 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 FEZF2Q8TBJ5 459 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 ZNF564Q8TBZ8 553 aaPredicted RBP15.66■□□□□ 0.1
VPS18-202ENST00000558474 FNIP1Q8TF40 1166 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 IRGQQ8WZA9 623 aa15.66■□□□□ 0.1
VPS18-202ENST00000558474 KCNK16Q96T55 309 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms