RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 FOCADQ5VW36 1801 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 SDR42E2A6NKP2 422 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 USP17L10C9JJH3 530 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 H3BNX3 289 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 MAGEB3O15480 346 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 STK10O94804 968 aaKnown RBP11.7□□□□□ -0.54
PCAT29-201ENST00000558411 PTPN7P35236 360 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 ALDH1A3P47895 512 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 HIRAP54198 1017 aaPredicted RBP11.7□□□□□ -0.54
PCAT29-201ENST00000558411 VCPP55072 806 aaKnown RBP11.7□□□□□ -0.54
PCAT29-201ENST00000558411 TAS2R40P59535 323 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 OASLQ15646 514 aaKnown RBP11.7□□□□□ -0.54
PCAT29-201ENST00000558411 GRAMD1BQ3KR37 738 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 MDH1BQ5I0G3 518 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 ODR4Q5SWX8 454 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 KBTBD6Q86V97 674 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 CRLF3Q8IUI8 442 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 ARID3BQ8IVW6 561 aaPredicted RBP11.7□□□□□ -0.54
PCAT29-201ENST00000558411 TTC13Q8NBP0 860 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 DQX1Q8TE96 717 aaKnown RBP11.7□□□□□ -0.54
PCAT29-201ENST00000558411 TRPC4APQ8TEL6 797 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 APBB2Q92870 758 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 E2F7Q96AV8 911 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 GCNAQ96QF7 691 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 CORO1BQ9BR76 489 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 MRPL1Q9BYD6 325 aaKnown RBP11.7□□□□□ -0.54
PCAT29-201ENST00000558411 INIPQ9NRY2 104 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 UBAP1Q9NZ09 502 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 FAF1Q9UNN5 650 aaPredicted RBP11.7□□□□□ -0.54
PCAT29-201ENST00000558411 INPP5FQ9Y2H2 1132 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 SBF2Q86WG5 1849 aa11.7□□□□□ -0.54
PCAT29-201ENST00000558411 MSH4O15457 936 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 FAM189A1O60320 539 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 FOSP01100 380 aaPredicted RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 MAPTP10636 758 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ACAT1P24752 427 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 SERPINB6P35237 376 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 SREBF1P36956 1147 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ALDH18A1P54886 795 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 AQP5P55064 265 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 RPS8P62241 208 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 SNRPFP62306 86 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 BST1Q10588 318 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 PTK7Q13308 1070 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 TEX44Q53QW1 395 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 GRAMD4Q6IC98 578 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 CCDC80Q76M96 950 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ZNF677Q86XU0 584 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 HELQQ8TDG4 1101 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 SLC44A1Q8WWI5 657 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 PRPF31Q8WWY3 499 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 HSPBAP1Q96EW2 488 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 SERAC1Q96JX3 654 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ACAP3Q96P50 834 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 MKS1Q9NXB0 559 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 SIRPGQ9P1W8 387 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 RSL24D1Q9UHA3 163 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 CDH22Q9UJ99 828 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 PSMD13Q9UNM6 376 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 COQ4Q9Y3A0 265 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 HBS1LQ9Y450 684 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 IKBKGQ9Y6K9 419 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 COPEO14579 308 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 MEIS2O14770 477 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ALDH2P05091 517 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 C6orf222P0C671 652 aaPredicted RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 FAM58BPP0C7Q3 252 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ETS1P14921 441 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 BTDP43251 543 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 CDK9P50750 372 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 GPC3P51654 580 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 COPAP53621 1224 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 HDAC4P56524 1084 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 TMPRSS15P98073 1019 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 MYBPC1Q00872 1141 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 SYCP2LQ5T4T6 812 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 TTBK2Q6IQ55 1244 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 PALM2Q8IXS6 379 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 PQLC1Q8N2U9 271 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 XXYLT1Q8NBI6 393 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 C17orf50Q8WW18 174 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ABHD8Q96I13 439 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 HAUS8Q9BT25 410 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 MRPL47Q9HD33 250 aaKnown RBP11.69□□□□□ -0.54
PCAT29-201ENST00000558411 POMPQ9Y244 141 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 ZNF711Q9Y462 761 aa11.69□□□□□ -0.54
PCAT29-201ENST00000558411 TMEM247A6NEH6 219 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 CAPN8A6NHC0 703 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 FAM86B1E9PN63 330 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 MATN2O00339 956 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SNNO75324 88 aaPredicted RBP11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SPAG6O75602 509 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 CRTAMO95727 393 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 ZBED1O96006 694 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 FAM86B2P0C5J1 330 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SRGAP2CP0DJJ0 459 aa11.68□□□□□ -0.54
PCAT29-201ENST00000558411 SRGAP2BP0DMP2 458 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms