RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 FAM186BQ8IYM0 893 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
HERC1-202ENST00000558324 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 EEF2KMTQ96G04 330 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 CCDC34Q96HJ3 373 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 SEMA4AQ9H3S1 761 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 TRPM5Q9NZQ8 1165 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 WNT6Q9Y6F9 365 aa12.69□□□□□ -0.38
HERC1-202ENST00000558324 ATP8B3O60423 1300 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 SOBPA7XYQ1 873 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 HLA-DRAP01903 254 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 FAM163BP0C2L3 166 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 KRT13P13646 458 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 P4HA1P13674 534 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 HDCP19113 662 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 GCLMP48507 274 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 IFNAR2P48551 515 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 CCR3P51677 355 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 TAF10Q12962 218 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 USP4Q13107 963 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 ZNF268Q14587 947 aaPredicted RBP12.68□□□□□ -0.38
HERC1-202ENST00000558324 ZNF77Q15935 545 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 SGSM1Q2NKQ1 1148 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 FAM35AQ86V20 835 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
HERC1-202ENST00000558324 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 TMEM174Q8WUU8 243 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 ERCC4Q92889 916 aaPredicted RBP12.68□□□□□ -0.38
HERC1-202ENST00000558324 TNIP3Q96KP6 325 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 C8orf48Q96LL4 319 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 KCNK16Q96T55 309 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 TTLL2Q9BWV7 592 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 ZSCAN32Q9NX65 697 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 DUS2Q9NX74 493 aaKnown RBP12.68□□□□□ -0.38
HERC1-202ENST00000558324 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 EHD2Q9NZN4 543 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 GCNT4Q9P109 453 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 HMGXB4Q9UGU5 601 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 PCDHGA2Q9Y5H1 932 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 VPS13AQ96RL7 3174 aa12.68□□□□□ -0.38
HERC1-202ENST00000558324 KIF26AQ9ULI4 1882 aaPredicted RBP12.68□□□□□ -0.38
HERC1-202ENST00000558324 SCAMP3O14828 347 aaKnown RBP12.67□□□□□ -0.38
HERC1-202ENST00000558324 IKBKBO14920 756 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 ASS1P00966 412 aaKnown RBP12.67□□□□□ -0.38
HERC1-202ENST00000558324 CCDC130P13994 396 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 RPL13P26373 211 aaKnown RBP12.67□□□□□ -0.38
HERC1-202ENST00000558324 ASPAP45381 313 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 CXCL12P48061 93 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 NDST1P52848 882 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 NOP14P78316 857 aaKnown RBP12.67□□□□□ -0.38
HERC1-202ENST00000558324 NUCB2P80303 420 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 ADAM9Q13443 819 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 CCINQ13939 588 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 PPP2R5DQ14738 602 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 PDGFRLQ15198 375 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 DGKKQ5KSL6 1271 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 NAIF1Q69YI7 327 aaPredicted RBP12.67□□□□□ -0.38
HERC1-202ENST00000558324 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
HERC1-202ENST00000558324 CPA6Q8N4T0 437 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 DCLK2Q8N568 766 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 ZBTB44Q8NCP5 570 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 TAS1R2Q8TE23 839 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 CHFRQ96EP1 664 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 CEP295NLQ96MC4 621 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 IER2Q9BTL4 223 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 IMPG2Q9BZV3 1241 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 FAM49BQ9NUQ9 324 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 C2orf42Q9NWW7 574 aa12.67□□□□□ -0.38
HERC1-202ENST00000558324 PTPRDP23468 1912 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 DENND4CQ5VZ89 1909 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 ZNF840PA6NDX5 716 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 MAPK13O15264 365 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 AP1G2O75843 785 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 TDGF1P13385 188 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 YWHAQP27348 245 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 HOXC13P31276 330 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 PSMC2P35998 433 aaKnown RBP12.66□□□□□ -0.38
HERC1-202ENST00000558324 PDE6CP51160 858 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 DMWDQ09019 674 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 LPAL2Q16609 132 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 NFIL3Q16649 462 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 ZCWPW2Q504Y3 356 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
HERC1-202ENST00000558324 FSTL4Q6MZW2 842 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 KIAA2013Q8IYS2 634 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 FUKQ8N0W3 1084 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 NUP93Q8N1F7 819 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 SPEM1Q8N4L4 309 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 SUMF1Q8NBK3 374 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 SLC2A14Q8TDB8 520 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 OSCP1Q8WVF1 389 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 TAF4BQ92750 862 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 FBXO32Q969P5 355 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 JAKMIP2Q96AA8 810 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 SMARCD1Q96GM5 515 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 SLITRK1Q96PX8 696 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 ECT2Q9H8V3 914 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms