RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 FAM228BP0C875 321 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 CCND2P30279 289 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SNRPFP62306 86 aaKnown RBP12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 ERVK-9P63128 1117 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 TRAP1Q12931 704 aaKnown RBP12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 NFX1Q12986 1120 aaKnown RBP12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 STILQ15468 1287 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 KCTD1Q719H9 257 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 BNIPLQ7Z465 357 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SYTL1Q8IYJ3 562 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SFRP1Q8N474 314 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SCAIQ8N9R8 606 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 TSEN2Q8NCE0 465 aaKnown RBP12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 ZNF75CPQ92670 426 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 ELMO2Q96JJ3 720 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SERHL2Q9H4I8 314 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SERHLQ9NQF3 203 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 COMMD8Q9NX08 183 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SFMBT1Q9UHJ3 866 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 ING4Q9UNL4 249 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 INO80Q9ULG1 1556 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 PIPSLA2A3N6 862 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 TK2O00142 265 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 ZBTB5O15062 677 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SEC24AO95486 1093 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 RALAP11233 206 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SP100P23497 879 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SAMD4BQ5PRF9 694 aaKnown RBP12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 ZBTB33Q86T24 672 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 FAM213AQ9BRX8 229 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 TCF7L2Q9NQB0 619 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 PTTG2Q9NZH5 202 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SERPINB13Q9UIV8 391 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SERPINE1P05121 402 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 MYL4P12829 197 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 PSMA3P25788 255 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 DDR2Q16832 855 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 FGD2Q7Z6J4 655 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 SPATA18Q8TC71 538 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 TRIM62Q9BVG3 475 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 OSBPL11Q9BXB4 747 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 DUSP10Q9Y6W6 482 aa12.18□□□□□ -0.46
CSPG4P12-201ENST00000558282 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 PIK3CDO00329 1044 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 MTSS1O43312 755 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 GALK1P51570 392 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 MXD4Q14582 209 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 SLC15A2Q16348 729 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 CCNG2Q16589 344 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 SZRD1Q7Z422 152 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 LRRC49Q8IUZ0 686 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 FBXO36Q8NEA4 188 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 TBC1D22BQ9NU19 505 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 KCND2Q9NZV8 630 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 TFR2Q9UP52 801 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 DCAF8L1A6NGE4 600 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 TLR2O60603 784 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 FAM20BO75063 409 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 IL6P05231 212 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 UQCRBP14927 111 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 FDFT1P37268 417 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 MAGEA10P43363 369 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 CENPLQ8N0S6 344 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 PDPRQ8NCN5 879 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 OR6B3Q8NGW1 331 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 HPS1Q92902 700 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 HES6Q96HZ4 224 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 APOPT1Q96IL0 206 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 SHOC2Q9UQ13 582 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 P4HBP07237 508 aaKnown RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 FAM153BP0C7A2 387 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 ATP6V1B2P21281 511 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 PUDPQ08623 228 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 PTK6Q13882 451 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 FAM153CQ494X1 144 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 MTERF2Q49AM1 385 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 TTC23Q5W5X9 447 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 FAM160B2Q86V87 743 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 MAB21L3Q8N8X9 362 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 SHCBP1Q8NEM2 672 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 BHMTQ93088 406 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 MLPHQ9BV36 600 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 THUMPD3Q9BV44 507 aaKnown RBP12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 NUAK2Q9H093 628 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 HDHD2Q9H0R4 259 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 JMJD4Q9H9V9 463 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 ARHGEF3Q9NR81 526 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 NMRK1Q9NWW6 199 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 CROTQ9UKG9 612 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 PCDHA6Q9UN73 950 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 PCDHA8Q9Y5H6 950 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 CCDC182A6NF36 153 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 CST8O60676 142 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 CAMTA2O94983 1202 aa12.17□□□□□ -0.46
CSPG4P12-201ENST00000558282 LRPAP1P30533 357 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms