RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 OASLQ15646 514 aaKnown RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 C6orf118Q5T5N4 469 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 HIBCHQ6NVY1 386 aaPredicted RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 NOTUMQ6P988 496 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 ZC3H18Q86VM9 953 aaKnown RBP11.09□□□□□ -0.63
TPM1-210ENST00000558264 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 MCRS1Q96EZ8 462 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 VRTNQ9H8Y1 702 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 FAM169AQ9Y6X4 670 aa11.09□□□□□ -0.63
TPM1-210ENST00000558264 TRIP12Q14669 1992 aaPredicted RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 MYADML2A6NDP7 307 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 RRN3P2A6NIE6 340 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 ZNF865P0CJ78 1059 aaPredicted RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 CDH6P55285 790 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 ZNF268Q14587 947 aaPredicted RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 DCAF4L1Q3SXM0 396 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 EXOC3L1Q86VI1 746 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 ANKMY2Q8IV38 441 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 ANKRD42Q8N9B4 389 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 MAGEB5Q9BZ81 275 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 NRCAMQ92823 1304 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 A8MXQ7 604 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 DNALI1O14645 258 aaPredicted RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 GABBR2O75899 941 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 TRUB2O95900 331 aaKnown RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 KRT7P08729 469 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 FGFR1P11362 822 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 GPD1P21695 349 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 PSEN2P49810 448 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 ATXN1P54253 815 aaKnown RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 SOX4Q06945 474 aaPredicted RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 SNX17Q15036 470 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 SOWAHAQ2M3V2 549 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 ZC3H12AQ5D1E8 599 aaKnown RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 MORN1Q5T089 497 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 ANKRD22Q5VYY1 191 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 C1orf228Q6PIY5 440 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 LCLAT1Q6UWP7 414 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 UNC45BQ8IWX7 931 aa11.08□□□□□ -0.64
TPM1-210ENST00000558264 PRMT1Q99873 361 aaKnown RBP11.08□□□□□ -0.64
TPM1-210ENST00000558264 MEIS3P2A8K0S8 358 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 FAM107AO95990 144 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 AGTP01019 485 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 MAGEA4P43358 317 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 C9orf57Q5W0N0 161 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 POLNQ7Z5Q5 900 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 TAX1BP1Q86VP1 789 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 CCDC13Q8IYE1 715 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 FAM71DQ8N9W8 422 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 ARRDC4Q8NCT1 418 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 BEST2Q8NFU1 509 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 NDRG1Q92597 394 aaKnown RBP11.07□□□□□ -0.64
TPM1-210ENST00000558264 ARHGEF2Q92974 986 aaKnown RBP11.07□□□□□ -0.64
TPM1-210ENST00000558264 XPO6Q96QU8 1125 aaKnown RBP11.07□□□□□ -0.64
TPM1-210ENST00000558264 WDR35Q9P2L0 1181 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 TCRBV7S3A2A0A539 114 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 C2CD4BA6NLJ0 364 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 CTSHP09668 335 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 LCP1P13796 627 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 MMP13P45452 471 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 GABRB2P47870 512 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 RABGGTBP53611 331 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 COPS2P61201 443 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 FKBP1BP68106 108 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 KYAT1Q16773 422 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 CYP4V2Q6ZWL3 525 aaPredicted RBP11.07□□□□□ -0.64
TPM1-210ENST00000558264 ZBED8Q8IZ13 594 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 SLC35B2Q8TB61 432 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 ZFP42Q96MM3 310 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 KCNK9Q9NPC2 374 aa11.07□□□□□ -0.64
TPM1-210ENST00000558264 INTS9Q9NV88 658 aaKnown RBP11.07□□□□□ -0.64
TPM1-210ENST00000558264 TPX2Q9ULW0 747 aaKnown RBP11.07□□□□□ -0.64
TPM1-210ENST00000558264 SMIM28A0A1B0GU29 152 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 SMIM35A0A1B0GVV1 85 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 A6NNZ2 444 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 POC1B-GALNT4F8VUJ3 575 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 CTCFP49711 727 aaPredicted RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 LIG3P49916 1009 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 ZNF143P52747 638 aaPredicted RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 EIF3EP60228 445 aaKnown RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 CAV1Q03135 178 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 LMNB2Q03252 620 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 TMED2Q15363 201 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 CA9Q16790 459 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 TUBB8Q3ZCM7 444 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 CCDC14Q49A88 953 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 SRRM1Q8IYB3 904 aaKnown RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 ZCCHC9Q8N567 271 aaKnown RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 FNIP1Q8TF40 1166 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 ATXN2LQ8WWM7 1075 aaKnown RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 RSAD2Q8WXG1 361 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 VPS37BQ9H9H4 285 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 ASNSD1Q9NWL6 643 aa11.06□□□□□ -0.64
TPM1-210ENST00000558264 MBLAC1A4D2B0 266 aaPredicted RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 PAPSS1O43252 624 aaPredicted RBP11.06□□□□□ -0.64
TPM1-210ENST00000558264 ATP2C2O75185 946 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms