RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 SMARCB1Q12824 385 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 PSMD5Q16401 504 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 ARHGAP29Q52LW3 1261 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
RORA-207ENST00000558234 RNF19BQ6ZMZ0 732 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 RASGEF1CQ8N431 466 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 TMEM169Q96HH4 297 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 TMEM176AQ96HP8 235 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 CDCA3Q99618 268 aaPredicted RBP12.16□□□□□ -0.46
RORA-207ENST00000558234 TCF25Q9BQ70 676 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 LHX5Q9H2C1 402 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 SLC28A3Q9HAS3 691 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 DDX43Q9NXZ2 648 aaKnown RBP12.16□□□□□ -0.46
RORA-207ENST00000558234 TIMM13Q9Y5L4 95 aaPredicted RBP12.16□□□□□ -0.46
RORA-207ENST00000558234 O00370 1275 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 GABRB2P47870 512 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 TPGS2Q68CL5 300 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 TCEAL8Q8IYN2 117 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 SCML4Q8N228 414 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 SLC35G2Q8TBE7 412 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 FEZF2Q8TBJ5 459 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 RFFLQ8WZ73 363 aa12.16□□□□□ -0.46
RORA-207ENST00000558234 FUBP3Q96I24 572 aaKnown RBP eCLIP12.16□□□□□ -0.464e-7■■■■■ 33.7
RORA-207ENST00000558234 AVENQ9NQS1 362 aaPredicted RBP12.16□□□□□ -0.46
RORA-207ENST00000558234 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.16□□□□□ -0.46
RORA-207ENST00000558234 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.15□□□□□ -0.46
RORA-207ENST00000558234 MYBPHLA2RUH7 354 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 H7C4K7 107 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 TNNC1P63316 161 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 C11orf63Q6NUN7 778 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 LCLAT1Q6UWP7 414 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 ZNF606Q8WXB4 792 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 AUTS2Q8WXX7 1259 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 MSLNLQ96KJ4 702 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 HUS1O60921 280 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 PTPN1P18031 435 aaKnown RBP12.15□□□□□ -0.46
RORA-207ENST00000558234 HOXA9P31269 272 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 LTBRP36941 435 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 MCOLN2Q8IZK6 566 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 RBBP8NLQ8NC74 664 aaPredicted RBP12.15□□□□□ -0.46
RORA-207ENST00000558234 CMASQ8NFW8 434 aaPredicted RBP12.15□□□□□ -0.46
RORA-207ENST00000558234 PCED1BQ96HM7 432 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 MTMR10Q9NXD2 777 aa12.15□□□□□ -0.46
RORA-207ENST00000558234 CTAGE9A4FU28 777 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 TGM5O43548 720 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 PALMO75781 387 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 P4HA1P13674 534 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 ATF6P18850 670 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 GNL1P36915 607 aaPredicted RBP12.15□□□□□ -0.47
RORA-207ENST00000558234 EPHA5P54756 1037 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 KRT17Q04695 432 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 WDR44Q5JSH3 913 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 ZNF280DQ6N043 979 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 TTC30AQ86WT1 665 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 ARNTL2Q8WYA1 636 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 S1PR5Q9H228 398 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 PNPLA8Q9NP80 782 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 CLEC1BQ9P126 229 aa12.15□□□□□ -0.47
RORA-207ENST00000558234 TTC7AQ9ULT0 858 aaPredicted RBP12.15□□□□□ -0.47
RORA-207ENST00000558234 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 PHACTR2O75167 634 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 ATF2P15336 505 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 PEX5P50542 639 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 PLEKHA7Q6IQ23 1121 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 KIAA1328Q86T90 577 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 EFHBQ8N7U6 833 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 ZNF461Q8TAF7 563 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 SPATA17Q96L03 361 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 SYT15Q9BQS2 421 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 MRPL17Q9NRX2 175 aaKnown RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 AFF4Q9UHB7 1163 aaKnown RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 KIAA1257Q9ULG3 409 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 HAPLN1P10915 354 aaPredicted RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 MMP8P22894 467 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 ADAM15Q13444 863 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 POTEHQ6S545 545 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 DSTYKQ6XUX3 929 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 NXF1Q9UBU9 619 aaKnown RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 GTF3C4Q9UKN8 822 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 FTLP02792 175 aaPredicted RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 H2AFZP0C0S5 128 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 NAA30Q147X3 362 aaPredicted RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 SCARA5Q6ZMJ2 495 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 H2AFVQ71UI9 128 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 TTC9BQ8N6N2 239 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
RORA-207ENST00000558234 TTLL2Q9BWV7 592 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 DEF6Q9H4E7 631 aa12.14□□□□□ -0.47
RORA-207ENST00000558234 MACROD2A1Z1Q3 448 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 ENC1O14682 589 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 BEST1O76090 585 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 SLU7O95391 586 aaKnown RBP12.13□□□□□ -0.47
RORA-207ENST00000558234 ZNF252P-AS1Q0IIN9 211 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 PPP1R26Q5T8A7 1209 aaPredicted RBP12.13□□□□□ -0.47
RORA-207ENST00000558234 TMC8Q8IU68 726 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 C12orf29Q8N999 325 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 SLC35F5Q8WV83 523 aa12.13□□□□□ -0.47
RORA-207ENST00000558234 SMOQ99835 787 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms