RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 GBP4Q96PP9 640 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 IWS1Q96ST2 819 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 RMDN3Q96TC7 470 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 C1QTNF1Q9BXJ1 281 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 FTOQ9C0B1 505 aaKnown RBP eCLIP6.96□□□□□ -1.3
CLPX-202ENST00000558103 UCKL1Q9NWZ5 548 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 HDAC6Q9UBN7 1215 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 B4GALT6Q9UBX8 382 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 ADAM29Q9UKF5 820 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 INVSQ9Y283 1065 aa6.96□□□□□ -1.3
CLPX-202ENST00000558103 LINC01553A4QN01 128 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 GOLGA6L22H0YM25 854 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 ZNF213O14771 459 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 B4GALT3O60512 393 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 POU3F2P20265 443 aaPredicted RBP6.95□□□□□ -1.3
CLPX-202ENST00000558103 CASTP20810 708 aaKnown RBP6.95□□□□□ -1.3
CLPX-202ENST00000558103 MC4RP32245 332 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 HSD17B4P51659 736 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 STXBP2Q15833 593 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 DGKDQ16760 1214 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 ASPRV1Q53RT3 343 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 CCDC178Q5BJE1 867 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 CATSPEREQ5SY80 951 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 CXXC5Q7LFL8 322 aaKnown RBP6.95□□□□□ -1.3
CLPX-202ENST00000558103 LRRTM3Q86VH5 581 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 IQCA1Q86XH1 822 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 SMC5Q8IY18 1101 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 ENAHQ8N8S7 591 aaPredicted RBP6.95□□□□□ -1.3
CLPX-202ENST00000558103 PPTC7Q8NI37 304 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 GDPD5Q8WTR4 605 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 MTMR8Q96EF0 704 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 ORAI3Q9BRQ5 295 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 KATNAL1Q9BW62 490 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 BTBD2Q9BX70 525 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 JMJD4Q9H9V9 463 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 PXMP2Q9NR77 195 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLPX-202ENST00000558103 ASB1Q9Y576 335 aa6.95□□□□□ -1.3
CLPX-202ENST00000558103 WDR81Q562E7 1941 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 ABHD14A-ACY1A0A1B0GW23 586 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 DVL2O14641 736 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 EIF3JO75822 258 aaKnown RBP6.94□□□□□ -1.3
CLPX-202ENST00000558103 KRT37O76014 449 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 ZNF286BP0CG31 522 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 HOXC8P31273 242 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 ERVK-21P61565 698 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 KRTAP1-1Q07627 177 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 STILQ15468 1287 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 KIAA0753Q2KHM9 967 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 HSDL1Q3SXM5 330 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 ZNF618Q5T7W0 954 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 ARHGEF16Q5VV41 709 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 CHST3Q7LGC8 479 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 KIF18BQ86Y91 864 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 KBTBD2Q8IY47 623 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 C7orf31Q8N865 590 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 HIPK4Q8NE63 616 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 RILPL2Q969X0 211 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 TGS1Q96RS0 853 aaKnown RBP6.94□□□□□ -1.3
CLPX-202ENST00000558103 RAD9AQ99638 391 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 PDCD2LQ9BRP1 358 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 IL25Q9H293 177 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 EPHX3Q9H6B9 360 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 KAT14Q9H8E8 782 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 ACSS2Q9NR19 701 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 MAP3K20Q9NYL2 800 aaKnown RBP6.94□□□□□ -1.3
CLPX-202ENST00000558103 PLAAQ9Y263 795 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 MRPL11Q9Y3B7 192 aaKnown RBP6.94□□□□□ -1.3
CLPX-202ENST00000558103 USP34Q70CQ2 3546 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
CLPX-202ENST00000558103 TTC3P53804 2025 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 ZBTB5O15062 677 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 CFBP00751 764 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 PARP1P09874 1014 aaKnown RBP6.93□□□□□ -1.3
CLPX-202ENST00000558103 UBA1P22314 1058 aaKnown RBP6.93□□□□□ -1.3
CLPX-202ENST00000558103 NEK4P51957 841 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 KIF11P52732 1056 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 HTRA4P83105 476 aaPredicted RBP6.93□□□□□ -1.3
CLPX-202ENST00000558103 SP2Q02086 613 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 PGM5Q15124 567 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 SLC35G1Q2M3R5 365 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 RNF187Q5TA31 235 aaPredicted RBP6.93□□□□□ -1.3
CLPX-202ENST00000558103 CNNM4Q6P4Q7 775 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 CWC27Q6UX04 472 aaKnown RBP6.93□□□□□ -1.3
CLPX-202ENST00000558103 STOX1Q6ZVD7 989 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 SERINC5Q86VE9 423 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 DHX37Q8IY37 1157 aaKnown RBP6.93□□□□□ -1.3
CLPX-202ENST00000558103 IL31RAQ8NI17 732 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 WDR48Q8TAF3 677 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 C16orf70Q9BSU1 422 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 LRFN3Q9BTN0 628 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 MAD2L2Q9UI95 211 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 MTUS1Q9ULD2 1270 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 FRMPD4Q14CM0 1322 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 EMSYQ7Z589 1322 aa6.93□□□□□ -1.3
CLPX-202ENST00000558103 FNDC1Q4ZHG4 1894 aaPredicted RBP6.92□□□□□ -1.3
CLPX-202ENST00000558103 ZNF318Q5VUA4 2279 aa6.92□□□□□ -1.3
CLPX-202ENST00000558103 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.92□□□□□ -1.3
CLPX-202ENST00000558103 KLRF2D3W0D1 207 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms