RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 WEE1P30291 646 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 LRPAP1P30533 357 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 MAPK8P45983 427 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 GUCY2FP51841 1108 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 CREB5Q02930 508 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 MAPK7Q13164 816 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 TRIM29Q14134 588 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 MYBPC2Q14324 1141 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 ACAP1Q15027 740 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 ZNF174Q15697 407 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 ME3Q16798 604 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 SH3PXD2AQ5TCZ1 1133 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 NAIF1Q69YI7 327 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 TRIM68Q6AZZ1 485 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 OVOS1Q6IE37 1185 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 USP37Q86T82 979 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 ITIH5Q86UX2 942 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 CAMKK1Q8N5S9 505 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 RIN3Q8TB24 985 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 GTF3C6Q969F1 213 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 SEPT5Q99719 369 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 FAM83CQ9BQN1 747 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 OXCT2Q9BYC2 517 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 EBF3Q9H4W6 596 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 TASP1Q9H6P5 420 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 FBRSL1Q9HCM7 1045 aaKnown RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 KMT5AQ9NQR1 393 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 GKN1Q9NS71 199 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 THG1LQ9NWX6 298 aaKnown RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 DDX56Q9NY93 547 aaKnown RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 CCL26Q9Y258 94 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 EML5Q05BV3 1969 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 KIF26AQ9ULI4 1882 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 TTC26A0AVF1 554 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 SRRM3A6NNA2 597 aaPredicted RBP6.33□□□□□ -1.4
VPS33B-207ENST00000557470 SFI1A8K8P3 1242 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 E9PMD0 336 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 RHOBTB1O94844 696 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 ARSAP15289 507 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 ATF6P18850 670 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 TYMPP19971 482 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 CDC25CP30307 473 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 NMT1P30419 496 aaKnown RBP6.33□□□□□ -1.4
VPS33B-207ENST00000557470 GUCY1B3Q02153 619 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 MCL1Q07820 350 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 RUNX3Q13761 415 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 VEPH1Q14D04 833 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 PTPAQ15257 358 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 ELF2Q15723 593 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 ZBTB6Q15916 424 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 SLC39A12Q504Y0 691 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 DAB2IPQ5VWQ8 1189 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 RINT1Q6NUQ1 792 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 ARMCX5Q6P1M9 558 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 DSTYKQ6XUX3 929 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 C1orf186Q6ZWK4 172 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 TMEM150AQ86TG1 271 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 CMTM8Q8IZV2 173 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 TMEM161BQ8NDZ6 487 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 OR10T2Q8NGX3 314 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 SNX29Q8TEQ0 813 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 ZCCHC14Q8WYQ9 949 aaKnown RBP6.33□□□□□ -1.4
VPS33B-207ENST00000557470 GATA6Q92908 595 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 USP13Q92995 863 aaPredicted RBP6.33□□□□□ -1.4
VPS33B-207ENST00000557470 GCNAQ96QF7 691 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 SCNM1Q9BWG6 230 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 HAPLN2Q9GZV7 340 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 PLEKHA5Q9HAU0 1116 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 HSFX1Q9UBD0 423 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 LRWD1Q9UFC0 647 aa6.33□□□□□ -1.4
VPS33B-207ENST00000557470 UBQLN1Q9UMX0 589 aaKnown RBP6.33□□□□□ -1.4
VPS33B-207ENST00000557470 GCN1Q92616 2671 aaKnown RBP6.33□□□□□ -1.4
VPS33B-207ENST00000557470 SETXQ7Z333 2677 aaKnown RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 ATG2BQ96BY7 2078 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 TMEM8BA6NDV4 472 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 PP2D1A8MPX8 630 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 LACTBL1A8MY62 500 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 PATE3B3GLJ2 98 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 K7ELQ4 463 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 CDX4O14627 284 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 CLDN3O15551 220 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 FAM189A1O60320 539 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 DKK1O94907 266 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 APBB3O95704 486 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 CLTAP09496 248 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 MAPTP10636 758 aaKnown RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 ODC1P11926 461 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 CEACAM1P13688 526 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 CYP3A5P20815 502 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 CSRP1P21291 193 aaKnown RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 DRD1P21728 446 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 GBP1P32455 592 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 AVPR1AP37288 418 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 TNFSF9P41273 254 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 MATR3P43243 847 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 SCTRP47872 440 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 TUFMP49411 452 aaKnown RBP6.32□□□□□ -1.4
VPS33B-207ENST00000557470 GALK1P51570 392 aa6.32□□□□□ -1.4
VPS33B-207ENST00000557470 LILRA4P59901 499 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms