RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	USP4	Q13107	963 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	MTF1	Q14872	753 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	GAB4	Q2WGN9	574 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	EML3	Q32P44	896 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CNNM4	Q6P4Q7	775 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	DPH6	Q7L8W6	267 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	KBTBD6	Q86V97	674 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ZNF507	Q8TCN5	953 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	HPDL	Q96IR7	371 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TRIM9	Q9C026	710 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TMEM206	Q9H813	350 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	ECT2	Q9H8V3	914 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	KIF9	Q9HAQ2	790 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	TFIP11	Q9UBB9	837 aa	Known RBP	11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	WNT6	Q9Y6F9	365 aa		11.96	□□□□□ -0.49
HNRNPC-231	ENST00000557336	CCDC163	A0A0D9SF12	145 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ZNF233	A6NK53	670 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TULP1	O00294	542 aa	Predicted RBP	11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TM4SF5	O14894	197 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CENPB	P07199	599 aa	Predicted RBP	11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	LHX1	P48742	406 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CACNA2D1	P54289	1103 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	FAM160A1	Q05DH4	1040 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	PDGFRL	Q15198	375 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SF3A2	Q15428	464 aa	Known RBP	11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CCDC6	Q16204	474 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SHC4	Q6S5L8	630 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TRAPPC11	Q7Z392	1133 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	LAPTM4B	Q86VI4	370 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SCN4B	Q8IWT1	228 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	NETO1	Q8TDF5	533 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	OSCP1	Q8WVF1	389 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	GAB3	Q8WWW8	586 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ZNF516	Q92618	1163 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	MYLPF	Q96A32	169 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SYT15	Q9BQS2	421 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	MRPL45	Q9BRJ2	306 aa	Known RBP	11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TRPC7	Q9HCX4	862 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	HSPBP1	Q9NZL4	362 aa		11.95	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ASPM	Q8IZT6	3477 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ANAPC1	Q9H1A4	1944 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	AXIN1	O15169	862 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	STX6	O43752	255 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	PDGFRB	P09619	1106 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TMEM191B	P0C7N4	346 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TCF3	P15923	654 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	DRD1	P21728	446 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	WARS	P23381	471 aa	Known RBP	11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	BDNF	P23560	247 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	PCSK1	P29120	753 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CASP1	P29466	404 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	MESP2	Q0VG99	397 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	DUOXA2	Q1HG44	320 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	PLA2G2C	Q5R387	149 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	THSD4	Q6ZMP0	1018 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CCDC65	Q8IXS2	484 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	PLEKHO2	Q8TD55	490 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SH3RF2	Q8TEC5	729 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	NOC3L	Q8WTT2	800 aa	Known RBP	11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SCFD1	Q8WVM8	642 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	PCED1B	Q96HM7	432 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SPATA17	Q96L03	361 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	P2RY13	Q9BPV8	354 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TTLL2	Q9BWV7	592 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	RNF38	Q9H0F5	515 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ARRDC1-AS1	Q9H2J1	176 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TNMD	Q9H2S6	317 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	AGPAT3	Q9NRZ7	376 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	DUS2	Q9NX74	493 aa	Known RBP	11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	UXT	Q9UBK9	157 aa	Predicted RBP	11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CDH9	Q9ULB4	789 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	GREB1	Q4ZG55	1949 aa		11.94	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SPAG17	Q6Q759	2223 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	EML5	Q05BV3	1969 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	TRAV19	A0A0A6YYK7	116 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	GOLGA8CP	A6NN73	597 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	KIAA0391	O15091	583 aa	Known RBP	11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SPTLC2	O15270	562 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	RPP40	O75818	363 aa	Known RBP	11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	EPN2	O95208	641 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CKM	P06732	381 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ADRB1	P08588	477 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	USP17L7	P0C7H9	530 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	OPRD1	P41143	372 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SNRNP35	Q16560	246 aa	Known RBP	11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	VSTM1	Q6UX27	236 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	CEP68	Q76N32	757 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	WDR49	Q8IV35	697 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	SFTPA1	Q8IWL2	248 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	RDH13	Q8NBN7	331 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ANKRD36BP1	Q96IX9	119 aa		11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	ZC3H10	Q96K80	434 aa	Known RBP	11.93	□□□□□ -0.5
HNRNPC-231	ENST00000557336	HHIP	Q96QV1	700 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms