RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 MRPL44Q9H9J2 332 aaKnown RBP13.17□□□□□ -0.3
SNX6-209ENST00000557265 TMEM74BQ9NUR3 256 aa13.17□□□□□ -0.3
SNX6-209ENST00000557265 RBAKQ9NYW8 714 aaPredicted RBP13.17□□□□□ -0.3
SNX6-209ENST00000557265 TRPM5Q9NZQ8 1165 aa13.17□□□□□ -0.3
SNX6-209ENST00000557265 TBC1D7Q9P0N9 293 aa13.17□□□□□ -0.3
SNX6-209ENST00000557265 MAGEC2Q9UBF1 373 aaPredicted RBP13.17□□□□□ -0.3
SNX6-209ENST00000557265 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
SNX6-209ENST00000557265 LAMA1P25391 3075 aa13.17□□□□□ -0.3
SNX6-209ENST00000557265 ANKRD11Q6UB99 2663 aaPredicted RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 SGK1O00141 431 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 KLF8O95600 359 aaPredicted RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 ENGP17813 658 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 LMO2P25791 158 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 GJB2P29033 226 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 TIE1P35590 1138 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 GRIK1P39086 918 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 USP46P62068 366 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 MESP2Q0VG99 397 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 DHCR24Q15392 516 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 L1TD1Q5T7N2 865 aaKnown RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 EMC10Q5UCC4 262 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 C4orf50Q6ZRC1 276 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 SYT12Q8IV01 421 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 IL17RCQ8NAC3 791 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 TXNDC5Q8NBS9 432 aaKnown RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 ZCCHC14Q8WYQ9 949 aaKnown RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 SPACA7Q96KW9 195 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 ACCSQ96QU6 501 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 PNKPQ96T60 521 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 RNF38Q9H0F5 515 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 PDE11AQ9HCR9 933 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 BCCIPQ9P287 314 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNX6-209ENST00000557265 MBD1Q9UIS9 605 aaPredicted RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 SIX4Q9UIU6 781 aa13.16□□□□□ -0.3
SNX6-209ENST00000557265 FASNP49327 2511 aaKnown RBP13.16□□□□□ -0.3
SNX6-209ENST00000557265 SPAARA0A1B0GVQ0 90 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 ZNF840PA6NDX5 716 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 KAT7O95251 611 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
SNX6-209ENST00000557265 PFKLP17858 780 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 BDNFP23560 247 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 SIM1P81133 766 aaPredicted RBP13.15□□□□□ -0.3
SNX6-209ENST00000557265 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 RHBDF2Q6PJF5 856 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 WHAMMQ8TF30 809 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 NOC3LQ8WTT2 800 aaKnown RBP13.15□□□□□ -0.3
SNX6-209ENST00000557265 HMGB4Q8WW32 186 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 SYT15Q9BQS2 421 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 POLMQ9NP87 494 aaPredicted RBP13.15□□□□□ -0.3
SNX6-209ENST00000557265 CRTAC1Q9NQ79 661 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 SMPD4Q9NXE4 827 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 SEL1LQ9UBV2 794 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 CDH9Q9ULB4 789 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
SNX6-209ENST00000557265 NEUROG3Q9Y4Z2 214 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 CPQQ9Y646 472 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 SPEGQ15772 3267 aa13.15□□□□□ -0.3
SNX6-209ENST00000557265 MYH11P35749 1972 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 EML5Q05BV3 1969 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 AKAP13Q12802 2813 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 SLC9A3R1O14745 358 aaPredicted RBP13.14□□□□□ -0.31
SNX6-209ENST00000557265 GCNT3O95395 438 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 BMP15O95972 392 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 ABL1P00519 1130 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 APODP05090 189 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 NEFLP07196 543 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 PDGFRBP09619 1106 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 TMEM191BP0C7N4 346 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
SNX6-209ENST00000557265 GARTP22102 1010 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 ITPKAP23677 461 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 ANXA13P27216 316 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 SLC7A9P82251 487 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 RING1Q06587 406 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 MYO1EQ12965 1108 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 MAPRE1Q15691 268 aaKnown RBP13.14□□□□□ -0.31
SNX6-209ENST00000557265 MAP7D1Q3KQU3 841 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 HSF5Q4G112 596 aaPredicted RBP13.14□□□□□ -0.31
SNX6-209ENST00000557265 SPDYCQ5MJ68 293 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 EOGTQ5NDL2 527 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 LYSMD4Q5XG99 296 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 LMBRD2Q68DH5 695 aaPredicted RBP13.14□□□□□ -0.31
SNX6-209ENST00000557265 LRSAM1Q6UWE0 723 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 DPH6Q7L8W6 267 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 PIP4P1Q86T03 277 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 C12orf40Q86WS4 652 aa13.14□□□□□ -0.31
SNX6-209ENST00000557265 SYCP3Q8IZU3 236 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms