RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ANKFY1Q9P2R3 1169 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 SLC9A2Q9UBY0 812 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 MAD2L2Q9UI95 211 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 CDH7Q9ULB5 785 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 UBIAD1Q9Y5Z9 338 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 SPTA1P02549 2419 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 SHISA7A6NL88 538 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 MAN2B1O00754 1011 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 ZNF213O14771 459 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 MAGEB2O15479 319 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 TEX28O15482 410 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 OFD1O75665 1012 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 RFPL2O75678 378 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 GLUD1P00367 558 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 IGFBP6P24592 240 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-223ENST00000557076 HOXA6P31267 233 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 CXCL12P48061 93 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 CCR3P51677 355 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 ACTR2P61160 394 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 HAND2P61296 217 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 CDC42EP1Q00587 391 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 CLCQ05315 142 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 MTMR1Q13613 665 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 TARBP2Q15633 366 aaKnown RBP5.32□□□□□ -1.56
SCFD1-223ENST00000557076 SLC35G1Q2M3R5 365 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 AASDHQ4L235 1098 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-223ENST00000557076 NOMO2Q5JPE7 1267 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 CRTC3Q6UUV7 619 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 NAT16Q8N8M0 369 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 SYT8Q8NBV8 401 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 RNF169Q8NCN4 708 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 SMARCC2Q8TAQ2 1214 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 CUL5Q93034 780 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 JMJD8Q96S16 334 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 PIGSQ96S52 555 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 DCTPP1Q9H773 170 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 JADE2Q9NQC1 790 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 TBC1D13Q9NVG8 400 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 UBP1Q9NZI7 540 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 DDX19BQ9UMR2 479 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 FAN1Q9Y2M0 1017 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 MYO18BQ8IUG5 2567 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 FNDC1Q4ZHG4 1894 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-223ENST00000557076 ITPR1Q14643 2758 aa5.32□□□□□ -1.56
SCFD1-223ENST00000557076 IGSF10Q6WRI0 2623 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 COL1A2P08123 1366 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 NFASCO94856 1347 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 PCNX2A6NKB5 2137 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 TGM5O43548 720 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 CYTH3O43739 400 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 KALRNO60229 2985 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 PAPSS2O95340 614 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-223ENST00000557076 C22orf31O95567 290 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 VTNP04004 478 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 SOD2P04179 222 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 CEACAM1P13688 526 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 TMOD1P28289 359 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 MCM4P33991 863 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 KCNC1P48547 511 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 SLC11A1P49279 550 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 RBM25P49756 843 aaKnown RBP5.31□□□□□ -1.56
SCFD1-223ENST00000557076 AK2P54819 239 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 NCKAP1LP55160 1127 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 NLRP11P59045 1033 aaKnown RBP5.31□□□□□ -1.56
SCFD1-223ENST00000557076 NFKB2Q00653 900 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 TAGLNQ01995 201 aaKnown RBP5.31□□□□□ -1.56
SCFD1-223ENST00000557076 RNASELQ05823 741 aaKnown RBP5.31□□□□□ -1.56
SCFD1-223ENST00000557076 USP17L6PQ6QN14 398 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 GLB1LQ6UWU2 654 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 ABHD15Q6UXT9 468 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 CYP2R1Q6VVX0 501 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 TAS1R1Q7RTX1 841 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 LONP2Q86WA8 852 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 ZNF280BQ86YH2 543 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 TBC1D10CQ8IV04 446 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 SLITRK4Q8IW52 837 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 METTL13Q8N6R0 699 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 TP53I13Q8NBR0 393 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-223ENST00000557076 FGF13Q92913 245 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 EVI5LQ96CN4 794 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 TMEM175Q9BSA9 504 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 LMAN1LQ9HAT1 526 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 KCNH7Q9NS40 1196 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 SUCOQ9UBS9 1254 aaKnown RBP5.31□□□□□ -1.56
SCFD1-223ENST00000557076 GGT7Q9UJ14 662 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 DOCK8Q8NF50 2099 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 AKAP13Q12802 2813 aa5.31□□□□□ -1.56
SCFD1-223ENST00000557076 NRP1O14786 923 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 ECI2O75521 394 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 CAPNS1P04632 268 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 CYBBP04839 570 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SSBP05455 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 URODP06132 367 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SPATA31D3P0C874 917 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 DARSP14868 501 aaKnown RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 MLLT6P55198 1093 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-223ENST00000557076 KRTAP10-2P60368 255 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 DSG1Q02413 1049 aa5.3□□□□□ -1.56
SCFD1-223ENST00000557076 MVKQ03426 396 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms