RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 DNASE2BQ8WZ79 361 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 MRPS31Q92665 395 aaKnown RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 NAF1Q96HR8 494 aaKnown RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 CCDC136Q96JN2 1154 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 SUSD3Q96L08 255 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 PPP1R10Q96QC0 940 aaKnown RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 TOPORSQ9NS56 1045 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 HSPBP1Q9NZL4 362 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 CCL26Q9Y258 94 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 FNDC3AQ9Y2H6 1198 aaKnown RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 SLC12A7Q9Y666 1083 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 ABCA7Q8IZY2 2146 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 GON4LQ3T8J9 2241 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 KNTC1P50748 2209 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 MGAQ8IWI9 3026 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 SMIM28A0A1B0GU29 152 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 MEI4A8MW99 385 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 K7ENP7 123 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 BCAT2O15382 392 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-245ENST00000556958 KLK10O43240 276 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 PCDHGA12O60330 932 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 DFNA5O60443 496 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 RFPL3O75679 317 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 OAZ2O95190 189 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 APODP05090 189 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 FURINP09958 794 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 MAOBP27338 520 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 GNA11P29992 359 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 YARSP54577 528 aaKnown RBP6.25□□□□□ -1.41
ATXN3-245ENST00000556958 FAM160A1Q05DH4 1040 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 USP4Q13107 963 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 XKR9Q5GH70 373 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 ARMCX5Q6P1M9 558 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 INO80CQ6PI98 192 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-245ENST00000556958 USP49Q70CQ1 688 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 USP37Q86T82 979 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 MON1AQ86VX9 555 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 SGMS1Q86VZ5 419 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 EFCAB13Q8IY85 973 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 REXO1Q8N1G1 1221 aaKnown RBP6.25□□□□□ -1.41
ATXN3-245ENST00000556958 C3orf58Q8NDZ4 430 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 CADM4Q8NFZ8 388 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 BICD2Q8TD16 824 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 CCDC12Q8WUD4 166 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-245ENST00000556958 KCNE4Q8WWG9 221 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 LENG9Q96B70 501 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 PGLYRP2Q96PD5 576 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 MTMR9Q96QG7 549 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 PNKPQ96T60 521 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 MIR1-1HGQ9H1L0 117 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 STARD5Q9NSY2 213 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 CALCOCO1Q9P1Z2 691 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 TFIP11Q9UBB9 837 aaKnown RBP6.25□□□□□ -1.41
ATXN3-245ENST00000556958 GDAQ9Y2T3 454 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 USP9YO00507 2555 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-245ENST00000556958 FBN2P35556 2912 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 MYH7P12883 1935 aa6.25□□□□□ -1.41
ATXN3-245ENST00000556958 GOLGA4Q13439 2230 aaKnown RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 A0A0A0MRY4 1105 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 ANO9A1A5B4 782 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 E7EWF7 191 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 KAT7O95251 611 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 LDOC1O95751 146 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 KRT10P13645 584 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 GABRG2P18507 467 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 RXRAP19793 462 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 GLDCP23378 1020 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 YWHABP31946 246 aaKnown RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 MCM4P33991 863 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 OPRD1P41143 372 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 EIF2DP41214 584 aaKnown RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 GRIA2P42262 883 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 LIFRP42702 1097 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 AFMP43652 599 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 CCT8P50990 548 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 RAB15P59190 212 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 ERVPABLB-1P60509 514 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 TLE1Q04724 770 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 PRPF4BQ13523 1007 aaKnown RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 CAPSQ13938 189 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 MYBPC2Q14324 1141 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 TEAD4Q15561 434 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 FAM187BQ17R55 369 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 EML3Q32P44 896 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 DCAF4L1Q3SXM0 396 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 SGO2Q562F6 1265 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 GLRA4Q5JXX5 417 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 HES3Q5TGS1 186 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 ANKRD45Q5TZF3 282 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 SDE2Q6IQ49 451 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 B3GNT9Q6UX72 402 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 VASH1Q7L8A9 365 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-245ENST00000556958 NOSTRINQ8IVI9 506 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 ZBTB8OSQ8IWT0 167 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 C4orf19Q8IY42 314 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 ATAD1Q8NBU5 361 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 TTC16Q8NEE8 873 aa6.24□□□□□ -1.41
ATXN3-245ENST00000556958 HIC2Q96JB3 615 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms