RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 GPD1P21695 349 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 IGFBP6P24592 240 aaPredicted RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CTGFP29279 349 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 MMP13P45452 471 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 YARSP54577 528 aaKnown RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CAV1Q03135 178 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CCDC142Q17RM4 750 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 SOWAHAQ2M3V2 549 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 PKDCCQ504Y2 493 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 BBS12Q6ZW61 710 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 NT5DC4Q86YG4 428 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 ARRDC4Q8NCT1 418 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 IPO4Q8TEX9 1081 aaKnown RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CLEC4CQ8WTT0 213 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 NKD2Q969F2 451 aaPredicted RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 CFAP57Q96MR6 1250 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 TRIM6Q9C030 488 aaPredicted RBP10.63□□□□□ -0.71
TMEM260-211ENST00000556648 PLEKHA5Q9HAU0 1116 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 SAYSD1Q9NPB0 183 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 DERAQ9Y315 318 aa10.63□□□□□ -0.71
TMEM260-211ENST00000556648 A6NNZ2 444 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 TRAPPC3O43617 180 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 AGTP01019 485 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 CCDC130P13994 396 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 TFE3P19532 575 aaPredicted RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ZNF157P51786 506 aaPredicted RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ZNF143P52747 638 aaPredicted RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ATP11AP98196 1134 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 PLCB3Q01970 1234 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 HADHQ16836 314 aaKnown RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 TUBB8Q3ZCM7 444 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 CCDC14Q49A88 953 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 C6orf118Q5T5N4 469 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 RNASEH2BQ5TBB1 312 aaKnown RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ANKRD22Q5VYY1 191 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 CYP4F22Q6NT55 531 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 OLFML1Q6UWY5 402 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 CYP4X1Q8N118 509 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ZCCHC9Q8N567 271 aaKnown RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 KCTD6Q8NC69 237 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 TRPV1Q8NER1 839 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 BEST2Q8NFU1 509 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 OR6B3Q8NGW1 331 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 KBTBD7Q8WVZ9 684 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ATXN2LQ8WWM7 1075 aaKnown RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 B3GNT5Q9BYG0 378 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 CACNG4Q9UBN1 327 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 DRG1Q9Y295 367 aaKnown RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 SMIM28A0A1B0GU29 152 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 GOLGA8MH3BSY2 632 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ITGAVP06756 1048 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 PDGFRBP09619 1106 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 PDGFRAP16234 1089 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 LMO2P25791 158 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ADORA2BP29275 332 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 LMNB2Q03252 620 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 SMYD5Q6GMV2 418 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 MFSD5Q6N075 450 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 CAPN12Q6ZSI9 719 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 EXOC3L1Q86VI1 746 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 UNC45BQ8IWX7 931 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 BBOF1Q8ND07 529 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 CMASQ8NFW8 434 aaPredicted RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 XPO6Q96QU8 1125 aaKnown RBP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 RBM15Q96T37 977 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM260-211ENST00000556648 CALN1Q9BXU9 219 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 ADAM33Q9BZ11 813 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 MIS12Q9H081 205 aa10.62□□□□□ -0.71
TMEM260-211ENST00000556648 TRPM7Q96QT4 1865 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 GMNCA6NCL1 334 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 MYO1CO00159 1063 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 PAPSS1O43252 624 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-211ENST00000556648 FAM107AO95990 144 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 MAGEA4P43358 317 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 MTM1Q13496 603 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 C17orf99Q6UX52 265 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 SCUBE3Q8IX30 993 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 LRRC52Q8N7C0 313 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 SMG8Q8ND04 991 aaKnown RBP10.61□□□□□ -0.71
TMEM260-211ENST00000556648 PRCCQ92733 491 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-211ENST00000556648 CNPY3Q9BT09 278 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 SLC4A5Q9BY07 1137 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 CNOT10Q9H9A5 744 aaKnown RBP10.61□□□□□ -0.71
TMEM260-211ENST00000556648 PCDH9Q9HC56 1237 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 ASNSD1Q9NWL6 643 aa10.61□□□□□ -0.71
TMEM260-211ENST00000556648 TPX2Q9ULW0 747 aaKnown RBP10.61□□□□□ -0.71
TMEM260-211ENST00000556648 TCRBV7S3A2A0A539 114 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 C17orf102A2RUQ5 167 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 MEIS3P2A8K0S8 358 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 A8MXQ7 604 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 EBAG9O00559 213 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 PIRO00625 290 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 RNF8O76064 485 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 DRD4P21917 467 aa10.6□□□□□ -0.71
TMEM260-211ENST00000556648 TKTP29401 623 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 RPL22P35268 128 aaKnown RBP10.6□□□□□ -0.71
TMEM260-211ENST00000556648 ATXN1P54253 815 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms