RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 PSMD6Q15008 389 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 DDR2Q16832 855 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 KNOP1Q1ED39 458 aaKnown RBP8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 SOWAHAQ2M3V2 549 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 ZNF528Q3MIS6 628 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 FSIP1Q8NA03 581 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 OR5B17Q8NGF7 314 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 SCFD1Q8WVM8 642 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 ATRIPQ8WXE1 791 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 CLDN23Q96B33 292 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 CCDC127Q96BQ5 260 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 CCDC34Q96HJ3 373 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 FUBP3Q96I24 572 aaKnown RBP eCLIP8.23□□□□□ -1.099e-8■■□□□ 14.1
HNRNPC-226ENST00000556628 SYT15Q9BQS2 421 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 ANP32EQ9BTT0 268 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 SNX25Q9H3E2 840 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 KIF9Q9HAQ2 790 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 LMAN1LQ9HAT1 526 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 TMLHEQ9NVH6 421 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 SIX4Q9UIU6 781 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 CDH9Q9ULB4 789 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 COL4A3Q01955 1670 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 COL4A2P08572 1712 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 OBSL1O75147 1896 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 SLC38A8A6NNN8 435 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 H3BM21 787 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 GABRDO14764 452 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 F11P03951 625 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 MYL1P05976 194 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 CYP2F1P24903 491 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 ANXA13P27216 316 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 ATICP31939 592 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 HOXD13P35453 343 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 CCR3P51677 355 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 AP3M2P53677 418 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 NLRP12P59046 1061 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 AMPD2Q01433 879 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 CYP27A1Q02318 531 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 CYP24A1Q07973 514 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 EHHADHQ08426 723 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 BIRC3Q13489 604 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 PKP1Q13835 747 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 BMT2Q1RMZ1 405 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 WDR72Q3MJ13 1102 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 CFAP221Q4G0U5 840 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 CC2D1AQ6P1N0 951 aaPredicted RBP8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 VSTM1Q6UX27 236 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 OSTM1Q86WC4 334 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 RALGPS2Q86X27 583 aaPredicted RBP8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 C12orf56Q8IXR9 622 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 GRAMD1CQ8IYS0 662 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 CMTM8Q8IZV2 173 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 MAB21L3Q8N8X9 362 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 OR6B3Q8NGW1 331 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 SYAP1Q96A49 352 aaPredicted RBP8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 EXOC4Q96A65 974 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 TRMT2BQ96GJ1 504 aaKnown RBP8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 FAM84AQ96KN4 292 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 MKNK1Q9BUB5 465 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 TDP1Q9NUW8 608 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 EHD2Q9NZN4 543 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 PCDHGA2Q9Y5H1 932 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 PTPRJQ12913 1337 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 FANCMQ8IYD8 2048 aa8.22□□□□□ -1.09
HNRNPC-226ENST00000556628 KIF26AQ9ULI4 1882 aaPredicted RBP8.21□□□□□ -1.09
HNRNPC-226ENST00000556628 TRAV19A0A0A6YYK7 116 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 A0A1B0GVL5 298 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 MYBPHLA2RUH7 354 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 POM121CA8CG34 1229 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 A8MXQ7 604 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 SPECC1L-ADORA2AF8WAN1 911 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 CALUO43852 315 aaPredicted RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 TACC1O75410 805 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 NOL4O94818 638 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 PRAMEF12O95522 483 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 CST3P01034 146 aaPredicted RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 PDGFRBP09619 1106 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 FAM163BP0C2L3 166 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 USP17L7P0C7H9 530 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 PFKFB1P16118 471 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 HMGA1P17096 107 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 TRIM21P19474 475 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 WARSP23381 471 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 CMA1P23946 247 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 GNL1P36915 607 aaPredicted RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 GRIK1P39086 918 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 MAGEA11P43364 429 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 SYKP43405 635 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 CXCL12P48061 93 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 GPR15P49685 360 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 PDE6CP51160 858 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 PSMC1P62191 440 aaKnown RBP8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 ITPRIPL2Q3MIP1 535 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 DGKKQ5KSL6 1271 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 SDHAF4Q5VUM1 108 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 TXNDC8Q6A555 127 aa8.21□□□□□ -1.1
HNRNPC-226ENST00000556628 MON1AQ86VX9 555 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms