RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MTMR3Q13615 1198 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 SYCE2Q6PIF2 218 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 IRF2BP2Q7Z5L9 587 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 ZMIZ2Q8NF64 920 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 OR8K1Q8NGG5 319 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 ANP32BQ92688 251 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 C8orf48Q96LL4 319 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 PRKD2Q9BZL6 878 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 UBE2ZQ9H832 354 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 ST7Q9NRC1 585 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 ZNHIT6Q9NWK9 470 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 AIPL1Q9NZN9 384 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 CEP83Q9Y592 693 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 SLC38A8A6NNN8 435 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 SETSIPP0DME0 302 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 HOXA9P31269 272 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 RGS7P49802 495 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 CDR2Q01850 454 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 SMYD5Q6GMV2 418 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 ITIH5Q86UX2 942 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 PIGZQ86VD9 579 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 HLA-CQ95604 372 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 CORO1BQ9BR76 489 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 HAUS4Q9H6D7 363 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 CSNK1G1Q9HCP0 422 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 ABHD10Q9NUJ1 306 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 HCFC1R1Q9NWW0 138 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 CDH22Q9UJ99 828 aa14.84□□□□□ -0.03
VIPAS39-208ENST00000556412 GOLGA6L6A8MZA4 724 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 PIK3R2O00459 728 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 SLC5A3P53794 718 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 COL19A1Q14993 1142 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 CES5AQ6NT32 575 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 DENND5BQ6ZUT9 1274 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 RTL10Q7L3V2 364 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 GPRIN1Q7Z2K8 1008 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 GRASPQ7Z6J2 395 aaPredicted RBP14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 DNAJB7Q7Z6W7 309 aaPredicted RBP14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 ZNF677Q86XU0 584 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 C1orf131Q8NDD1 294 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 DDX1Q92499 740 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 SYN2Q92777 582 aaPredicted RBP14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 ZNF707Q96C28 371 aaPredicted RBP14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 AGPAT1Q99943 283 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 PCDHGC3Q9UN70 934 aa14.83□□□□□ -0.04
VIPAS39-208ENST00000556412 XPO1O14980 1071 aaKnown RBP14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 CSH1P0DML2 217 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 CSH2P0DML3 217 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 MYL4P12829 197 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 NTHL1P78549 312 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 HS6ST3Q8IZP7 471 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 NUP93Q8N1F7 819 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 SCAMP5Q8TAC9 235 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 PSMG2Q969U7 264 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 SPATA17Q96L03 361 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 DNAJC7Q99615 494 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 LRRC4Q9HBW1 653 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 CD207Q9UJ71 328 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 SERPING1P05155 500 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 LCP1P13796 627 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 CHRNB2P17787 502 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 TNFAIP3P21580 790 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 GPD2P43304 727 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 USP46P62068 366 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 FMO1Q01740 532 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 PKDCCQ504Y2 493 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 NAA35Q5VZE5 725 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 PMF1Q6P1K2 205 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 TMEM35BQ8NCS4 154 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 CMASQ8NFW8 434 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 MSLNLQ96KJ4 702 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 ADAM7Q9H2U9 754 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 SYNCQ9H7C4 482 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 PRDM6Q9NQX0 595 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 ASAH2Q9NR71 780 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 DNMT3BQ9UBC3 853 aaKnown RBP14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 ASB3Q9Y575 518 aa14.82□□□□□ -0.04
VIPAS39-208ENST00000556412 PLEKP08567 350 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 PTPN2P17706 415 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 PRKCIP41743 596 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 PLA2G4AP47712 749 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 ITIH3Q06033 890 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 ADIGQ0VDE8 80 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 PABPC1LQ4VXU2 614 aaKnown RBP14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 ATAT1Q5SQI0 421 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 PDZD4Q76G19 769 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 ZNF571Q7Z3V5 609 aaPredicted RBP14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 GPR149Q86SP6 731 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 SIX6OS1Q8N1H7 587 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 TC2NQ8N9U0 490 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 SLC35F5Q8WV83 523 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 CPA5Q8WXQ8 436 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 NOX5Q96PH1 765 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 LHX5Q9H2C1 402 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 PNPLA8Q9NP80 782 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 CYTH4Q9UIA0 394 aa14.81□□□□□ -0.04
VIPAS39-208ENST00000556412 PRRC2BQ5JSZ5 2229 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms