RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 GKN1Q9NS71 199 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 RMND1Q9NWS8 449 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 COMMD8Q9NX08 183 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 GTSE1Q9NYZ3 720 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 TRPM5Q9NZQ8 1165 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 GCNT4Q9P109 453 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 CCL26Q9Y258 94 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 PTPRDP23468 1912 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 PATJQ8NI35 1801 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 GOLGA6L4A6NEF3 574 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 TRDMT1O14717 391 aaKnown RBP13.42□□□□□ -0.26
SNX6-207ENST00000556303 RTN3O95197 1032 aaPredicted RBP13.42□□□□□ -0.26
SNX6-207ENST00000556303 NR2F2P24468 414 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 GTF2H1P32780 548 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 CXCL12P48061 93 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 VAMP7P51809 220 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 ADAM9Q13443 819 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 CCINQ13939 588 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 EDRF1Q3B7T1 1238 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 COBLL1Q53SF7 1204 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 GPIHBP1Q8IV16 184 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 OSCP1Q8WVF1 389 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 ZFYVE19Q96K21 471 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 GSDMAQ96QA5 445 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 SMG9Q9H0W8 520 aaKnown RBP13.42□□□□□ -0.26
SNX6-207ENST00000556303 GOLPH3LQ9H4A5 285 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 ARHGAP26Q9UNA1 814 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 NME7Q9Y5B8 376 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 R4GN57 208 aa13.42□□□□□ -0.26
SNX6-207ENST00000556303 DCHS1Q96JQ0 3298 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 ZNF840PA6NDX5 716 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 F8VP50 259 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 AKAP3O75969 853 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 VNN1O95497 513 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
SNX6-207ENST00000556303 CKMP06732 381 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 PRR29P0C7W0 189 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 TDGF1P13385 188 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 KRT13P13646 458 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 HDCP19113 662 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 HOXA6P31267 233 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 PSMC2P35998 433 aaKnown RBP13.41□□□□□ -0.26
SNX6-207ENST00000556303 GRSF1Q12849 480 aaKnown RBP eCLIP13.41□□□□□ -0.26
SNX6-207ENST00000556303 USP4Q13107 963 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 MTF1Q14872 753 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 ZNF77Q15935 545 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 CCDC142Q17RM4 750 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 TXNDC11Q6PKC3 985 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 ELOA2Q8IYF1 753 aaPredicted RBP13.41□□□□□ -0.26
SNX6-207ENST00000556303 FMR1NBQ8N0W7 255 aaPredicted RBP13.41□□□□□ -0.26
SNX6-207ENST00000556303 NUP93Q8N1F7 819 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 CRYBG2Q8N1P7 616 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 PDZD8Q8NEN9 1154 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 CCDC26Q8TAB7 109 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 RUBCNQ92622 972 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 ATP2A3Q93084 1043 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 SLITRK1Q96PX8 696 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 IMPG2Q9BZV3 1241 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 DNAI2Q9GZS0 605 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 FAM124BQ9H5Z6 455 aaPredicted RBP13.41□□□□□ -0.26
SNX6-207ENST00000556303 CYP3A43Q9HB55 503 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 TRPC7Q9HCX4 862 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 HPS4Q9NQG7 708 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 HOOK1Q9UJC3 728 aaKnown RBP13.41□□□□□ -0.26
SNX6-207ENST00000556303 OBSL1O75147 1896 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 KIF26AQ9ULI4 1882 aaPredicted RBP13.41□□□□□ -0.26
SNX6-207ENST00000556303 ANAPC1Q9H1A4 1944 aa13.41□□□□□ -0.26
SNX6-207ENST00000556303 COL4A3Q01955 1670 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 CEP250Q9BV73 2442 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 STX10O60499 249 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 ATG13O75143 517 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 SMC2O95347 1197 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 DRD1P21728 446 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 CNR2P34972 360 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 SOX9P48436 509 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 CDH8P55286 799 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 DLG4P78352 724 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 SLC7A9P82251 487 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 TNK2Q07912 1038 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 NR1H3Q13133 447 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 FBXO43Q4G163 708 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 ZCWPW2Q504Y3 356 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 TMEM196Q5HYL7 178 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 C1orf220Q5T0J3 134 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 SNX30Q5VWJ9 437 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 FAM186BQ8IYM0 893 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 CPA6Q8N4T0 437 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 TTC39CQ8N584 583 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 GPR161Q8N6U8 529 aaKnown RBP13.4□□□□□ -0.26
SNX6-207ENST00000556303 SUMF1Q8NBK3 374 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 STKLD1Q8NE28 680 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 SMARCD1Q96GM5 515 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 TIGD1Q96MW7 591 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 CYP2S1Q96SQ9 504 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 B3GNT5Q9BYG0 378 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 EPC1Q9H2F5 836 aa13.4□□□□□ -0.26
SNX6-207ENST00000556303 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms