RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 GLUD1P00367 558 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 URODP06132 367 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 LAMP2P13473 410 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 GCFC2P16383 781 aaKnown RBP9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 YWHABP31946 246 aaKnown RBP9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 ID4P47928 161 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 MXD4Q14582 209 aaPredicted RBP9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 STAMQ92783 540 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 AIFM3Q96NN9 605 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 NFKBIZQ9BYH8 718 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 ZSWIM4Q9H7M6 989 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 XPNPEP1Q9NQW7 623 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 SLC2A4RGQ9NR83 387 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 FBXL21Q9UKT6 434 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 CLUHO75153 1309 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 A0A1B0GUA9 196 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 F8W810 466 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 TGM5O43548 720 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 LMNAP02545 664 aaKnown RBP9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 SPATA31D3P0C874 917 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 XRCC6P12956 609 aaKnown RBP eCLIP9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 OR1G1P47890 313 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 GLUD2P49448 558 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 EMC2Q15006 297 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 RALGPS1Q5JS13 557 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 NOTUMQ6P988 496 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 SPATA31D4Q6ZUB0 917 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 NEK8Q86SG6 692 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 ZSWIM9Q86XI8 627 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 SMG7Q92540 1137 aaKnown RBP9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 DYDC2Q96IM9 177 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 LXNQ9BS40 222 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 ZDHHC7Q9NXF8 308 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 KCNJ14Q9UNX9 436 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 PRG3Q9Y2Y8 225 aaPredicted RBP9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 HES2Q9Y543 173 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 ZFP37Q9Y6Q3 630 aaPredicted RBP9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
GTF2A1-204ENST00000556268 CACNA1IQ9P0X4 2223 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 CPLX1O14810 134 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 REC8O95072 547 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 ARF4P18085 180 aaPredicted RBP9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 GDNFP39905 211 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 SCNN1GP51170 649 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 STARD6P59095 220 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 RNF4P78317 190 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 MBTD1Q05BQ5 628 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 NCBP1Q09161 790 aaKnown RBP9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 HTR4Q13639 388 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 CTTNQ14247 550 aaKnown RBP9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 USP41Q3LFD5 358 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 XKR9Q5GH70 373 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 EARS2Q5JPH6 523 aaKnown RBP9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 FYB2Q5VWT5 728 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 PALB2Q86YC2 1186 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 BORCS6Q96GS4 357 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 NAP1L4Q99733 375 aaKnown RBP9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 CLSTN3Q9BQT9 956 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 RPP25Q9BUL9 199 aaKnown RBP9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 TBC1D17Q9HA65 648 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 ANKEF1Q9NU02 776 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 SIT1Q9Y3P8 196 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 CYP46A1Q9Y6A2 500 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 DOCK8Q8NF50 2099 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 OTOGLQ3ZCN5 2332 aa9.9□□□□□ -0.82
GTF2A1-204ENST00000556268 DNAH14Q0VDD8 3507 aa9.9□□□□□ -0.83
GTF2A1-204ENST00000556268 ZMYM2Q9UBW7 1377 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 C2orf16Q68DN1 1984 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 CCDC194A0A1B0GVG4 234 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 CCNT1O60563 726 aaKnown RBP9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 SP9P0CG40 484 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 GLULP15104 373 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 NME1P15531 152 aaKnown RBP9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 GLRA2P23416 452 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 MLH1P40692 756 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 EGR3Q06889 387 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 KCNMB1Q16558 191 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 FUT10Q6P4F1 479 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 CPLX2Q6PUV4 134 aaKnown RBP9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 KRTAP19-1Q8IUB9 90 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 C1orf210Q8IVY1 113 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 TPH2Q8IWU9 490 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 MAML2Q8IZL2 1156 aaPredicted RBP9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 CPB2Q96IY4 423 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 B3GALT6Q96L58 329 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 EIF2AK1Q9BQI3 630 aaKnown RBP9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 DDX23Q9BUQ8 820 aaKnown RBP9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 FZD8Q9H461 694 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 GOLGA2P5Q9HBQ8 144 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 GJB4Q9NTQ9 266 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 KIAA1522Q9P206 1035 aaPredicted RBP9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 TMEM59LQ9UK28 342 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 ADAM28Q9UKQ2 775 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 CA14Q9ULX7 337 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 GPR179Q6PRD1 2367 aa9.89□□□□□ -0.83
GTF2A1-204ENST00000556268 INO80B-WBP1J3KQ70 363 aa9.88□□□□□ -0.83
GTF2A1-204ENST00000556268 TADA2AO75478 443 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms