RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 TRIM68Q6AZZ1 485 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 FSTL4Q6MZW2 842 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 UNQ6494/PRO21346Q6UXR6 183 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 C1orf186Q6ZWK4 172 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 C11orf96Q7Z7L8 435 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 HNRNPLLQ8WVV9 542 aaKnown RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 BICD1Q96G01 975 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 ZC3H10Q96K80 434 aaKnown RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 HHIPQ96QV1 700 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 DNAJC7Q99615 494 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 C1QTNF2Q9BXJ5 285 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 ZNF700Q9H0M5 742 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 FOXP1Q9H334 677 aaPredicted RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 EBF3Q9H4W6 596 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 C17orf75Q9HAS0 396 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 PLEKHA5Q9HAU0 1116 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 HPS4Q9NQG7 708 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 SH2B1Q9NRF2 756 aaPredicted RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 VPS45Q9NRW7 570 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 GKN1Q9NS71 199 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 SCHIP1Q9P0W5 487 aaPredicted RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 UBQLN1Q9UMX0 589 aaKnown RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 NOL7Q9UMY1 257 aaKnown RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 ADAMTS9Q9P2N4 1935 aa6.3□□□□□ -1.4
PRKCH-220ENST00000556164 ASCC3Q8N3C0 2202 aaKnown RBP6.3□□□□□ -1.4
PRKCH-220ENST00000556164 MYOFQ9NZM1 2061 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TTC26A0AVF1 554 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 C4orf47A7E2U8 309 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 PP2D1A8MPX8 630 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 LACTBL1A8MY62 500 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ALG1L2C9J202 215 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TRDMT1O14717 391 aaKnown RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 RHOBTB1O94844 696 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 CAVIN2O95810 425 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 USP17L7P0C7H9 530 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 MAPTP10636 758 aaKnown RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 PLS3P13797 630 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ARSAP15289 507 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ATF6P18850 670 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 CYP3A5P20815 502 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 GUCY2CP25092 1073 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 U2AF2P26368 475 aaKnown RBP eCLIP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 CDC25AP30304 524 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 GBP1P32455 592 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 AVPR1AP37288 418 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TRAPPC10P48553 1259 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TUFMP49411 452 aaKnown RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 LIG4P49917 911 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 NEK4P51957 841 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 AMPD2Q01433 879 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ZNF252P-AS1Q0IIN9 211 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ST3GAL1Q11201 340 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 BFSP1Q12934 665 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 RUNX3Q13761 415 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 PDIA5Q14554 519 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 KARSQ15046 597 aaKnown RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TCEA2Q15560 299 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ZBTB6Q15916 424 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 SH3PXD2AQ5TCZ1 1133 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 CC2D1AQ6P1N0 951 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ZPBP2Q6X784 338 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 KCNK18Q7Z418 384 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 CMTM8Q8IZV2 173 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 PGBD3Q8N328 593 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 CAMKK1Q8N5S9 505 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 C4orf32Q8N8J7 132 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 MAB21L3Q8N8X9 362 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 IGSF22Q8N9C0 903 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TMEM161BQ8NDZ6 487 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TTC16Q8NEE8 873 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 OR10T2Q8NGX3 314 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 RPLP0P6Q8NHW5 317 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 SLC39A13Q96H72 371 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 SENP8Q96LD8 212 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 FAM83CQ9BQN1 747 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TIPINQ9BVW5 301 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 NT5C1AQ9BXI3 368 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 SLC46A2Q9BY10 475 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 HAPLN2Q9GZV7 340 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 DUSP15Q9H1R2 295 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 RPF1Q9H9Y2 349 aaKnown RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 IL21Q9HBE4 155 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ABI2Q9NYB9 513 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 HSFX1Q9UBD0 423 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ADAMTS1Q9UHI8 967 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 KCNG1Q9UIX4 513 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 CCL26Q9Y258 94 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 ATP8A1Q9Y2Q0 1164 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 TNRC6BQ9UPQ9 1833 aaKnown RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 MYO18AQ92614 2054 aaKnown RBP6.29□□□□□ -1.4
PRKCH-220ENST00000556164 LAMA1P25391 3075 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 BAHCC1Q9P281 2608 aa6.29□□□□□ -1.4
PRKCH-220ENST00000556164 FRYQ5TBA9 3013 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 CHD6Q8TD26 2715 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 PCNX2A6NKB5 2137 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 BCLAF3A2AJT9 711 aaKnown RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 OTOL1A6NHN0 477 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-220ENST00000556164 H0YCG3 227 aa6.28□□□□□ -1.4
PRKCH-220ENST00000556164 HNRNPDLO14979 420 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms