RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ATP13A4Q4VNC1 1196 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 FAM126BQ8IXS8 530 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 ARFGAP1Q8N6T3 406 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 SLITRK1Q96PX8 696 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 HNRNPABQ99729 332 aaKnown RBP15.47■□□□□ 0.07
VPS33B-205ENST00000556096 HERPUD2Q9BSE4 406 aa15.47■□□□□ 0.07
VPS33B-205ENST00000556096 C2CD4BA6NLJ0 364 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 TULP2O00295 520 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 INPPL1O15357 1258 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 HCRTO43612 131 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 RNF8O76064 485 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 KRT1P04264 644 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 GPD1P21695 349 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 GBP1P32455 592 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 PCK1P35558 622 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 GJC1P36383 396 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 ACADSBP45954 432 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 LHX1P48742 406 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 AARSP49588 968 aaKnown RBP eCLIP15.46■□□□□ 0.074e-6■■■■■ 30.6
VPS33B-205ENST00000556096 RGS7P49802 495 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 CLCNKBP51801 687 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 SLC6A3Q01959 620 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 HLTFQ14527 1009 aaKnown RBP eCLIP15.46■□□□□ 0.07
VPS33B-205ENST00000556096 CCNG2Q16589 344 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 UPP1Q16831 310 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 WSCD1Q658N2 575 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 OLFML1Q6UWY5 402 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 ZNF598Q86UK7 904 aaKnown RBP15.46■□□□□ 0.07
VPS33B-205ENST00000556096 DDX42Q86XP3 938 aaKnown RBP eCLIP15.46■□□□□ 0.07
VPS33B-205ENST00000556096 ECHDC2Q86YB7 292 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 CCDC105Q8IYK2 499 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 EMC1Q8N766 993 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 B3GALNT2Q8NCR0 500 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 RNF25Q96BH1 459 aaPredicted RBP15.46■□□□□ 0.07
VPS33B-205ENST00000556096 HSFY1Q96LI6 401 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 GDAP1L1Q96MZ0 367 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 LPIN3Q9BQK8 851 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 TRIM51Q9BSJ1 452 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 CNPY3Q9BT09 278 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 DCLK3Q9C098 648 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 RGS18Q9NS28 235 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 FEZ2Q9UHY8 353 aaPredicted RBP15.46■□□□□ 0.07
VPS33B-205ENST00000556096 EFR3BQ9Y2G0 817 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 TANC1Q9C0D5 1861 aa15.46■□□□□ 0.07
VPS33B-205ENST00000556096 DPYSL4O14531 572 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 GABBR2O75899 941 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 FAM153BP0C7A2 387 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 CCDC130P13994 396 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 PTPN1P18031 435 aaKnown RBP15.46■□□□□ 0.06
VPS33B-205ENST00000556096 GRIK3Q13003 919 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 FAM153CQ494X1 144 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 ODF2Q5BJF6 829 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 SPOCD1Q6ZMY3 1216 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 SYDE1Q6ZW31 735 aaPredicted RBP15.46■□□□□ 0.06
VPS33B-205ENST00000556096 C7orf61Q8IZ16 206 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 SPATA18Q8TC71 538 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 DPF3Q92784 378 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 PRDM5Q9NQX1 630 aaPredicted RBP15.46■□□□□ 0.06
VPS33B-205ENST00000556096 FAM153AQ9UHL3 310 aa15.46■□□□□ 0.06
VPS33B-205ENST00000556096 TJP3O95049 919 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 EOMESO95936 686 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 PDGFRAP16234 1089 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 ADORA2BP29275 332 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 TFDP3Q5H9I0 405 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 ALS2CLQ60I27 953 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 TXNRD3NBQ6F5E7 133 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 MFSD7Q6UXD7 560 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 DSTYKQ6XUX3 929 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 ARCQ7LC44 396 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 ANKS1BQ7Z6G8 1248 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 SLC2A14Q8TDB8 520 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 GRK7Q8WTQ7 553 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 C1orf54Q8WWF1 131 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 RXFP2Q8WXD0 754 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 KHSRPQ92945 711 aaKnown RBP eCLIP15.45■□□□□ 0.06
VPS33B-205ENST00000556096 UROC1Q96N76 676 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 NCAPGQ9BPX3 1015 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 HEMGNQ9BXL5 484 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 MED4Q9NPJ6 270 aa15.45■□□□□ 0.06
VPS33B-205ENST00000556096 hCG_1818297A0A087WSY0 165 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 C9IYK1 514 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 PI4K2BG5E9Z4 385 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 XPO1O14980 1071 aaKnown RBP15.44■□□□□ 0.06
VPS33B-205ENST00000556096 PAPSS1O43252 624 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-205ENST00000556096 ECEL1O95672 775 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 CAPN2P17655 700 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 IGFBP6P24592 240 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-205ENST00000556096 HSPA9P38646 679 aaKnown RBP15.44■□□□□ 0.06
VPS33B-205ENST00000556096 CDKN2BP42772 138 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 FAM189BP81408 668 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 TUSC3Q13454 348 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 LLGL1Q15334 1064 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 ZFYVE27Q5T4F4 411 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 FAM43BQ6ZT52 329 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-205ENST00000556096 RNF169Q8NCN4 708 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 C3orf58Q8NDZ4 430 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 CMASQ8NFW8 434 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-205ENST00000556096 ATL2Q8NHH9 583 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 RAPGEF5Q92565 580 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 DUSP16Q9BY84 665 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms