RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 SSTR3P32745 418 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-220ENST00000555634 PBX2P40425 430 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 GPC5P78333 572 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 PDE4CQ08493 712 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 ADCY1Q08828 1119 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 RAB33AQ14088 237 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 MTF1Q14872 753 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 MMS22LQ6ZRQ5 1243 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 CLEC20AQ6ZU45 233 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 TAS1R1Q7RTX1 841 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 ITIH5Q86UX2 942 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 ZSCAN30Q86W11 494 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 ARHGAP18Q8N392 663 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 ACRBPQ8NEB7 543 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 SLC30A5Q8TAD4 765 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 SPPL3Q8TCT6 385 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 RFFLQ8WZ73 363 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 C18orf8Q96DM3 657 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 SYT11Q9BT88 431 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 SELENOOQ9BVL4 669 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 FBXO44Q9H4M3 255 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 CYP4F11Q9HBI6 524 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 PARVAQ9NVD7 372 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 UVRAGQ9P2Y5 699 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 ADGRG1Q9Y653 693 aa11.81□□□□□ -0.52
SHMT2-220ENST00000555634 OBSL1O75147 1896 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 WDR27A2RRH5 827 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 CLDN5O00501 218 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 TEX28O15482 410 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 KIF5CO60282 957 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 C1RP00736 705 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 CALCAP01258 141 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 ATF2P15336 505 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 MMP8P22894 467 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 GPD2P43304 727 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 NOP2P46087 812 aaKnown RBP11.8□□□□□ -0.52
SHMT2-220ENST00000555634 EPHB3P54753 998 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 ADIGQ0VDE8 80 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 ASTE1Q2TB18 679 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-220ENST00000555634 LRIT3Q3SXY7 679 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 FAM102AQ5T9C2 384 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-220ENST00000555634 DCUN1D2Q6PH85 259 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 RNF19BQ6ZMZ0 732 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 MON1BQ7L1V2 547 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 RTL10Q7L3V2 364 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 PIGZQ86VD9 579 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 TTC30AQ86WT1 665 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 MRPL43Q8N983 215 aaKnown RBP11.8□□□□□ -0.52
SHMT2-220ENST00000555634 GDPD5Q8WTR4 605 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 AUTS2Q8WXX7 1259 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 KCTD13Q8WZ19 329 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 C8orf48Q96LL4 319 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 TMEM209Q96SK2 561 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 CDCA3Q99618 268 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-220ENST00000555634 PKMYT1Q99640 499 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 UBXN6Q9BZV1 441 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 ISCUQ9H1K1 167 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 CERS4Q9HA82 394 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 RXFP1Q9HBX9 757 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 AVENQ9NQS1 362 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-220ENST00000555634 CTTNBP2NLQ9P2B4 639 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 MYO1AQ9UBC5 1043 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 UXTQ9UBK9 157 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-220ENST00000555634 CNOT8Q9UFF9 292 aaKnown RBP11.8□□□□□ -0.52
SHMT2-220ENST00000555634 NME7Q9Y5B8 376 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 NCANO14594 1321 aa11.8□□□□□ -0.52
SHMT2-220ENST00000555634 A0A0A6YYK5 440 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-220ENST00000555634 C2orf71A6NGG8 1288 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 F8VP50 259 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 GRM6O15303 877 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 TBC1D4O60343 1298 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 CNPP09543 421 aaKnown RBP11.79□□□□□ -0.52
SHMT2-220ENST00000555634 CSH1P0DML2 217 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 CSH2P0DML3 217 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 LCP1P13796 627 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 CYP2F1P24903 491 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 RGS7P49802 495 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 GALCP54803 685 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 ZNF697Q5TEC3 545 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 OR6B2Q6IFH4 312 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 PALB2Q86YC2 1186 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 MCOLN2Q8IZK6 566 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 C3orf20Q8ND61 904 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 SPATA17Q96L03 361 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 SLITRK1Q96PX8 696 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 PCDHB18PQ96TA0 734 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 CLSTN3Q9BQT9 956 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 CSNK1G1Q9HCP0 422 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 LZTFL1Q9NQ48 299 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 CNGB3Q9NQW8 809 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 COMMD8Q9NX08 183 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 YIPF1Q9Y548 306 aa11.79□□□□□ -0.52
SHMT2-220ENST00000555634 HELZP42694 1942 aaKnown RBP11.78□□□□□ -0.52
SHMT2-220ENST00000555634 DENND4CQ5VZ89 1909 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 BTNL10A8MVZ5 291 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 E5RJQ4 531 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 GOLGA8SH3BPF8 625 aa11.78□□□□□ -0.52
SHMT2-220ENST00000555634 KIF2AO00139 706 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms