RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 HESX1Q9UBX0 185 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 COG5Q9UP83 839 aa13.42□□□□□ -0.26
SYNE2-219ENST00000555323 FAM92AA1XBS5 289 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 XPO1O14980 1071 aaKnown RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 XYLBO75191 536 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 SOAT2O75908 522 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 CFHP08603 1231 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 CSH1P0DML2 217 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 CSH2P0DML3 217 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 HMGA1P17096 107 aaKnown RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 PTPN2P17706 415 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 CHRNB2P17787 502 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 PLA2G4AP47712 749 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 GPR15P49685 360 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 EPHA5P54756 1037 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 MAP3K7CLP57077 242 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 SLC8A3P57103 927 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 CDR2Q01850 454 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 PDE4CQ08493 712 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 BST2Q10589 180 aaKnown RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 GOLGA7BQ2TAP0 167 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 E4F1Q66K89 784 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 DENND5BQ6ZUT9 1274 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 ITIH5Q86UX2 942 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 SCN4BQ8IWT1 228 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 NUP93Q8N1F7 819 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 C12orf76Q8N812 135 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 SMRP1Q8NCR6 262 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 MAFAQ8NHW3 353 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 UBA3Q8TBC4 463 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 KCTD13Q8WZ19 329 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 HSFY1Q96LI6 401 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 ZNF512Q96ME7 567 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 DNAJC7Q99615 494 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 TTLL2Q9BWV7 592 aa13.41□□□□□ -0.26
SYNE2-219ENST00000555323 AVENQ9NQS1 362 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 BZW2Q9Y6E2 419 aaKnown RBP13.41□□□□□ -0.26
SYNE2-219ENST00000555323 SLC38A8A6NNN8 435 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 CCL16O15467 120 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 CYP1A1P04798 512 aaPredicted RBP13.4□□□□□ -0.26
SYNE2-219ENST00000555323 TPM1P09493 284 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 ANXA13P27216 316 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 FMO1Q01740 532 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 VEPH1Q14D04 833 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 ASIC2Q16515 512 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 RAB41Q5JT25 222 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 ATAT1Q5SQI0 421 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 HGSNATQ68CP4 663 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 PMF1Q6P1K2 205 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 DENND1BQ6P3S1 775 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 TMC5Q6UXY8 1006 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 PIGZQ86VD9 579 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 CNGA4Q8IV77 575 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 ELMOD1Q8N336 334 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 LEMD2Q8NC56 503 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 GIPC2Q8TF65 315 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 PPM1EQ8WY54 764 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 SUSD6Q92537 303 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 TRMT2BQ96GJ1 504 aaKnown RBP13.4□□□□□ -0.26
SYNE2-219ENST00000555323 AGPAT1Q99943 283 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 CYLDQ9NQC7 956 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 EHD2Q9NZN4 543 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 IMPACTQ9P2X3 320 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 DNMT3BQ9UBC3 853 aaKnown RBP13.4□□□□□ -0.26
SYNE2-219ENST00000555323 USP3Q9Y6I4 520 aa13.4□□□□□ -0.26
SYNE2-219ENST00000555323 PTPRDP23468 1912 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 AKR1B15C9JRZ8 316 aaPredicted RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 M0QYV0 167 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 TULP2O00295 520 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 MFAP3LO75121 409 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 LSM8O95777 96 aaKnown RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 SERPING1P05155 500 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 MMEP08473 750 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 UNGP13051 313 aaPredicted RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 KIF11P52732 1056 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 CDK17Q00537 523 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 ARID5AQ03989 594 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 RARS2Q5T160 578 aaKnown RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 SDHAF4Q5VUM1 108 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 CES5AQ6NT32 575 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 WDR59Q6PJI9 974 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 TRIM72Q6ZMU5 477 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 TMEM110Q86TL2 294 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 TMC8Q8IU68 726 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 SCML4Q8N228 414 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 OLIG1Q8TAK6 271 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 FEZF2Q8TBJ5 459 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 SMG7Q92540 1137 aaKnown RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 SECISBP2LQ93073 1101 aaKnown RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 WDR6Q9NNW5 1121 aaKnown RBP13.39□□□□□ -0.27
SYNE2-219ENST00000555323 ABHD10Q9NUJ1 306 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 CD207Q9UJ71 328 aa13.39□□□□□ -0.27
SYNE2-219ENST00000555323 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms