RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 IPO4Q8TEX9 1081 aaKnown RBP6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 FAM227BQ96M60 508 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 C1QTNF3Q9BXJ4 246 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 TMOD4Q9NZQ9 345 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 ZMYND8Q9ULU4 1186 aaPredicted RBP6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 CA14Q9ULX7 337 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 LGALS16A8MUM7 142 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 FOXD2O60548 495 aaPredicted RBP6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 TLR5O60602 858 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 GATA3P23771 443 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 SLC5A2P31639 672 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 BCAT1P54687 386 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 SLC25A3Q00325 362 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 GUCY1B3Q02153 619 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 NSUN2Q08J23 767 aaKnown RBP eCLIP6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 GALNT1Q10472 559 aaPredicted RBP6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 FOXO1Q12778 655 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 KCNAB1Q14722 419 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 NRN1LQ496H8 165 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 TIGD2Q4W5G0 525 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 VPS53Q5VIR6 699 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 MANEALQ5VSG8 457 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 RNF207Q6ZRF8 634 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 USP49Q70CQ1 688 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 GATAD2AQ86YP4 633 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 SMAP1Q8IYB5 467 aaPredicted RBP6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 ATG16L2Q8NAA4 619 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 ADAM2Q99965 735 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 PAGR1Q9BTK6 254 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 ISCA1Q9BUE6 129 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 TPSD1Q9BZJ3 242 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 AMBRA1Q9C0C7 1298 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 SLC25A32Q9H2D1 315 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 GBA2Q9HCG7 927 aaPredicted RBP6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 TBCCD1Q9NVR7 557 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 DACT1Q9NYF0 836 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 LRFN1Q9P244 771 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 DNAJB11Q9UBS4 358 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 DKK2Q9UBU2 259 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 SERTAD3Q9UJW9 196 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 FZD1Q9UP38 647 aa6.37□□□□□ -1.39
CKS1BP1-201ENST00000555221 PIP5K1BO14986 540 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 CCNT2O60583 730 aaKnown RBP6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 CSF1RP07333 972 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 ZNF20P17024 532 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 NR4A1P22736 598 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 EPHA3P29320 983 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 PTGS2P35354 604 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 SERPINF1P36955 418 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 ITIH3Q06033 890 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 PTCHD3Q3KNS1 767 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 SPDYAQ5MJ70 313 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 RAP1GAP2Q684P5 730 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 ZNF354CQ86Y25 554 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 B3GALNT2Q8NCR0 500 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 TRAPPC12Q8WVT3 735 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 ZDHHC12Q96GR4 267 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 ACTRT3Q9BYD9 372 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 LUZP4Q9P127 313 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 IGSF9Q9P2J2 1179 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 SSX2IPQ9Y2D8 614 aa6.36□□□□□ -1.39
CKS1BP1-201ENST00000555221 AQP12BA6NM10 295 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 ACKR2O00590 384 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 PLSCR1O15162 318 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 SNX2O60749 519 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 SPDEFO95238 335 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 GLP2RO95838 553 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 ITGA5P08648 1049 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 SRGNP10124 158 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 MST1P26927 711 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 CCT5P48643 541 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 POLE2P56282 527 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 EFEMP1Q12805 493 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 GPS1Q13098 491 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 FZD5Q13467 585 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 CDSNQ15517 529 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 ARHGEF19Q8IW93 802 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 OSCP1Q8WVF1 389 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 HAS1Q92839 578 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 LENG9Q96B70 501 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 PTCD3Q96EY7 689 aaKnown RBP6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 PLEKHG4BQ96PX9 1271 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 PRPF18Q99633 342 aaKnown RBP6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 TMEM120AQ9BXJ8 343 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 MAGEH1Q9H213 219 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 AS3MTQ9HBK9 375 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 HELLSQ9NRZ9 838 aa6.35□□□□□ -1.39
CKS1BP1-201ENST00000555221 UNC119BA6NIH7 251 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 NPHP1O15259 732 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 PPP3CBP16298 524 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 NPPBP16860 134 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 ZFP36P26651 326 aaKnown RBP6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 UQCRC1P31930 480 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 MTHFSP49914 203 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 PGDP52209 483 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 NXPH1P58417 271 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 ADAM17P78536 824 aa6.34□□□□□ -1.39
CKS1BP1-201ENST00000555221 BIRC3Q13489 604 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms