RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 DR1Q01658 176 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 CCDC14Q49A88 953 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 ADAT2Q7Z6V5 191 aaKnown RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 DDX42Q86XP3 938 aaKnown RBP eCLIP9.37□□□□□ -0.91
TDP1-210ENST00000554976 FUKQ8N0W3 1084 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 SPATA18Q8TC71 538 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 ERP44Q9BS26 406 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.37□□□□□ -0.91
TDP1-210ENST00000554976 PLEKHA4Q9H4M7 779 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 HMX1Q9NP08 348 aaPredicted RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 CRTAC1Q9NQ79 661 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 ST7Q9NRC1 585 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 ARVCFO00192 962 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 THP07101 528 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 FLT3P36888 993 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 BST2Q10589 180 aaKnown RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 OTUD1Q5VV17 481 aaPredicted RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 DRICH1Q6PGQ1 229 aaPredicted RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 CCDC137Q6PK04 289 aaKnown RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 RCOR2Q8IZ40 523 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 KRT222Q8N1A0 295 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 EMC1Q8N766 993 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 B3GALNT2Q8NCR0 500 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 RAPGEF5Q92565 580 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 EPB41L4BQ9H329 900 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 FAM49BQ9NUQ9 324 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 A8MXQ7 604 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 HHLA1C9JL84 531 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 ATP2C2O75185 946 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 BEST1O76090 585 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 TRUB2O95900 331 aaKnown RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 PCK1P35558 622 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 SLC6A3Q01959 620 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 DSC1Q08554 894 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 ADCY1Q08828 1119 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 UAP1Q16222 522 aaPredicted RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 SH3PXD2AQ5TCZ1 1133 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 SPOCD1Q6ZMY3 1216 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 BHLHA9Q7RTU4 235 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 ZDHHC17Q8IUH5 632 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 CMASQ8NFW8 434 aaPredicted RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 OR6B3Q8NGW1 331 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 CCDC26Q8TAB7 109 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 KCTD13Q8WZ19 329 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 RUNDC3BQ96NL0 473 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 RSAD1Q9HA92 442 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
TDP1-210ENST00000554976 DDX56Q9NY93 547 aaKnown RBP9.37□□□□□ -0.91
TDP1-210ENST00000554976 H0YGN5 161 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 DNM1LO00429 736 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 CYB561D2O14569 222 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 XPO1O14980 1071 aaKnown RBP9.36□□□□□ -0.91
TDP1-210ENST00000554976 DAPK3O43293 454 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 BCAT1P54687 386 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 GRIK3Q13003 919 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 PTK6Q13882 451 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 TAF5Q15542 800 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 RAB41Q5JT25 222 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 CLLU1OSQ5K130 101 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 WSCD1Q658N2 575 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 RHBDF2Q6PJF5 856 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 MFSD7Q6UXD7 560 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 MAATS1Q7Z4T9 603 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 TMEM86AQ8N2M4 240 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 CLEC4CQ8WTT0 213 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 ADAM2Q99965 735 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 SEZ6LQ9BYH1 1024 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 OGDHLQ9ULD0 1010 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 EFR3BQ9Y2G0 817 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.36□□□□□ -0.91
TDP1-210ENST00000554976 NFS1Q9Y697 457 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 GOLGA6L10A0A0M3HER8 536 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 GOLGA8SH3BPF8 625 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 NBNO60934 754 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 GPD1P21695 349 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 PSMA2P25787 234 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 KLRC2P26717 231 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 RPL21P46778 160 aaKnown RBP9.36□□□□□ -0.91
TDP1-210ENST00000554976 PLCB3Q01970 1234 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 TIGD5Q53EQ6 642 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 FAM171BQ6P995 826 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 IQCKQ8N0W5 287 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 SLC2A14Q8TDB8 520 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 ART4Q93070 314 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 NT5C3BQ969T7 300 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 RBM41Q96IZ5 413 aaKnown RBP9.36□□□□□ -0.91
TDP1-210ENST00000554976 SENP8Q96LD8 212 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 GLT1D1Q96MS3 346 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 DUSP16Q9BY84 665 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 B3GNT5Q9BYG0 378 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 OSBPL8Q9BZF1 889 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 UBN1Q9NPG3 1134 aa9.36□□□□□ -0.91
TDP1-210ENST00000554976 PTPN1P18031 435 aaKnown RBP9.35□□□□□ -0.91
TDP1-210ENST00000554976 SMC1AQ14683 1233 aaKnown RBP9.35□□□□□ -0.91
TDP1-210ENST00000554976 CCNG2Q16589 344 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 CLEC20AQ6ZU45 233 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 SLC26A9Q7LBE3 791 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 ZMIZ2Q8NF64 920 aa9.35□□□□□ -0.91
TDP1-210ENST00000554976 UROC1Q96N76 676 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms