RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ZNF526Q8TF50 670 aaPredicted RBP3.63□□□□□ -1.83
SEC23A-207ENST00000554615 ARNTL2Q8WYA1 636 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 CTNNBL1Q8WYA6 563 aaPredicted RBP3.63□□□□□ -1.83
SEC23A-207ENST00000554615 CEP295NLQ96MC4 621 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 GLIS2Q9BZE0 524 aaPredicted RBP3.63□□□□□ -1.83
SEC23A-207ENST00000554615 C2orf40Q9H1Z8 148 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 MRPL47Q9HD33 250 aaKnown RBP3.63□□□□□ -1.83
SEC23A-207ENST00000554615 KCNK4Q9NYG8 393 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 FBXW11Q9UKB1 542 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 GJD2Q9UKL4 321 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 ITGA11Q9UKX5 1188 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 STX8Q9UNK0 236 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 NAALADL1Q9UQQ1 740 aa3.63□□□□□ -1.83
SEC23A-207ENST00000554615 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.63□□□□□ -1.83
SEC23A-207ENST00000554615 LRRK1Q38SD2 2015 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 H3BNX3 289 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ACKR2O00590 384 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ATP9BO43861 1147 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 GAS7O60861 476 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 USP2O75604 605 aaPredicted RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ECEL1O95672 775 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 CYP11A1P05108 521 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 C8BP07358 591 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 SBK3P0C264 359 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 PRR35P0CG20 571 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ATP6V1C1P21283 382 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 WARSP23381 471 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 KDELR1P24390 212 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 IL1R2P27930 398 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 STIP1P31948 543 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ADRA1AP35348 466 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 GRM5P41594 1212 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 INHBCP55103 352 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MAGOHP61326 146 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 KRT17Q04695 432 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MTMR1Q13613 665 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 DPYSL3Q14195 570 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ZYXQ15942 572 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MTERF2Q49AM1 385 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 CELF3Q5SZQ8 465 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 SCARA3Q6AZY7 606 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TAOK1Q7L7X3 1001 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MAVSQ7Z434 540 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MRPL10Q7Z7H8 261 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 DDX42Q86XP3 938 aaKnown RBP eCLIP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 PPIL6Q8IXY8 311 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 CCDC197Q8NCU1 140 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 PAPD5Q8NDF8 572 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 CHAC2Q8WUX2 184 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MAGOHBQ96A72 148 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 WNK4Q96J92 1243 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 RMDN2Q96LZ7 410 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NR1H4Q96RI1 486 aaPredicted RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 SORT1Q99523 831 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ADAM33Q9BZ11 813 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NEUROG3Q9Y4Z2 214 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ASB14A6NK59 587 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 DCLK1O15075 740 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 KLK8O60259 260 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 GCNT3O95395 438 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 HLA-DRAP01903 254 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 LMNAP02545 664 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 KCNA5P22460 613 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ACVR2AP27037 513 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 SERPINB5P36952 375 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ITGA8P53708 1063 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 PRKAA2P54646 552 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 DNAJB13P59910 316 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 RPS6P62753 249 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NOP14P78316 857 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ARHGAP1Q07960 439 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 DHX9Q08211 1270 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NFX1Q12986 1120 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 EMC2Q15006 297 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MSS51Q4VC12 460 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF484Q5JVG2 852 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MBLAC2Q68D91 279 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 DPY19L2Q6NUT2 758 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 AADACL2Q6P093 401 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 STRADAQ7RTN6 431 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 NET1Q7Z628 596 aaPredicted RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF410Q86VK4 478 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 HACE1Q8IYU2 909 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 CPA6Q8N4T0 437 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 CCDC89Q8N998 374 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TTC17Q96AE7 1141 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 MIEF2Q96C03 454 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 APOPT1Q96IL0 206 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TRAPPC9Q96Q05 1148 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ZC3H12CQ9C0D7 883 aaKnown RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 IL22Q9GZX6 179 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TAOK3Q9H2K8 898 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 ARNT2Q9HBZ2 717 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 HESX1Q9UBX0 185 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 PACSIN2Q9UNF0 486 aaPredicted RBP3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TELO2Q9Y4R8 837 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 RIPK3Q9Y572 518 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TMEM131Q92545 1883 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 TICRRQ7Z2Z1 1910 aa3.62□□□□□ -1.83
SEC23A-207ENST00000554615 CXCL11O14625 94 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms