RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MMP17Q9ULZ9 603 aa25.88■■□□□ 1.73
FOXA1-204ENST00000554607 INVSQ9Y283 1065 aa25.88■■□□□ 1.73
FOXA1-204ENST00000554607 MYO16Q9Y6X6 1858 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 KIAA1549LQ6ZVL6 1849 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 LNP1A1A4G5 178 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 FRMD3A2A2Y4 597 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 LEFTY2O00292 366 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 ALDH1A2O94788 518 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 BDNFP23560 247 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 LMO2P25791 158 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 SEC13P55735 322 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 MRPS21P82921 87 aaKnown RBP25.87■■□□□ 1.73
FOXA1-204ENST00000554607 DUOXA2Q1HG44 320 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 ANO7Q6IWH7 933 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 CYP2U1Q7Z449 544 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 KBTBD7Q8WVZ9 684 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 FAM84AQ96KN4 292 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 UPF2Q9HAU5 1272 aaKnown RBP25.87■■□□□ 1.73
FOXA1-204ENST00000554607 TMEM9BQ9NQ34 198 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 CHD6Q8TD26 2715 aa25.87■■□□□ 1.73
FOXA1-204ENST00000554607 VPS37CA5D8V6 355 aaPredicted RBP25.86■■□□□ 1.73
FOXA1-204ENST00000554607 ZNF233A6NK53 670 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 SLC9A3R1O14745 358 aaPredicted RBP25.86■■□□□ 1.73
FOXA1-204ENST00000554607 TRIM66O15016 1216 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 WARSP23381 471 aaKnown RBP25.86■■□□□ 1.73
FOXA1-204ENST00000554607 PSMC1P62191 440 aaKnown RBP25.86■■□□□ 1.73
FOXA1-204ENST00000554607 SLC7A9P82251 487 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 CYP27A1Q02318 531 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 CRY1Q16526 586 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 STXBP4Q6ZWJ1 553 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 ABCA7Q8IZY2 2146 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 TTLL2Q9BWV7 592 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 CRTAC1Q9NQ79 661 aa25.86■■□□□ 1.73
FOXA1-204ENST00000554607 NUP205Q92621 2012 aa25.85■■□□□ 1.73
FOXA1-204ENST00000554607 PRPF6O94906 941 aaKnown RBP25.85■■□□□ 1.73
FOXA1-204ENST00000554607 PDCP20941 246 aa25.85■■□□□ 1.73
FOXA1-204ENST00000554607 STAT6P42226 847 aa25.85■■□□□ 1.73
FOXA1-204ENST00000554607 LMBRD2Q68DH5 695 aaPredicted RBP25.85■■□□□ 1.73
FOXA1-204ENST00000554607 ADGRG2Q8IZP9 1017 aa25.85■■□□□ 1.73
FOXA1-204ENST00000554607 MYCBPAPQ8TBZ2 947 aa25.85■■□□□ 1.73
FOXA1-204ENST00000554607 CLIC6Q96NY7 704 aa25.85■■□□□ 1.73
FOXA1-204ENST00000554607 MMS19Q96T76 1030 aa25.85■■□□□ 1.73
FOXA1-204ENST00000554607 CEP295Q9C0D2 2601 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 THADAQ6YHU6 1953 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 ZNF840PA6NDX5 716 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 PDGFRBP09619 1106 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 CEACAM1P13688 526 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 CSRP1P21291 193 aaKnown RBP25.84■■□□□ 1.73
FOXA1-204ENST00000554607 USP46P62068 366 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 NOP14P78316 857 aaKnown RBP25.84■■□□□ 1.73
FOXA1-204ENST00000554607 ZXDBP98169 803 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 HSF5Q4G112 596 aaPredicted RBP25.84■■□□□ 1.73
FOXA1-204ENST00000554607 SH3PXD2AQ5TCZ1 1133 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 FILIP1Q7Z7B0 1213 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 CCDC65Q8IXS2 484 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 CCDC33Q8N5R6 958 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 MDGA1Q8NFP4 955 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 OR5B17Q8NGF7 314 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 KIAA1586Q9HCI6 787 aa25.84■■□□□ 1.73
FOXA1-204ENST00000554607 HELZP42694 1942 aaKnown RBP25.84■■□□□ 1.73
FOXA1-204ENST00000554607 CYP17A1P05093 508 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 FAM163BP0C2L3 166 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 EIF2DP41214 584 aaKnown RBP25.83■■□□□ 1.73
FOXA1-204ENST00000554607 DHPSP49366 369 aaPredicted RBP25.83■■□□□ 1.73
FOXA1-204ENST00000554607 ZNF252P-AS1Q0IIN9 211 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 DHCR24Q15392 516 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 GAB4Q2WGN9 574 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 PCED1BQ96HM7 432 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 C8orf48Q96LL4 319 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 PNKPQ96T60 521 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 FGFBP2Q9BYJ0 223 aa25.83■■□□□ 1.73
FOXA1-204ENST00000554607 GIPC1O14908 333 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 OLFM2O95897 454 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 APODP05090 189 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 BCKDHBP21953 392 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 GNL1P36915 607 aaPredicted RBP25.82■■□□□ 1.72
FOXA1-204ENST00000554607 TDRD10Q5VZ19 366 aaKnown RBP25.82■■□□□ 1.72
FOXA1-204ENST00000554607 TTC30AQ86WT1 665 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 DDX42Q86XP3 938 aaKnown RBP eCLIP25.82■■□□□ 1.72
FOXA1-204ENST00000554607 WDR49Q8IV35 697 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 OLIG1Q8TAK6 271 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 PIGKQ92643 395 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 SPACA7Q96KW9 195 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 PANK2Q9BZ23 570 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 RNF38Q9H0F5 515 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 SNX25Q9H3E2 840 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 POLMQ9NP87 494 aaPredicted RBP25.82■■□□□ 1.72
FOXA1-204ENST00000554607 CPQQ9Y646 472 aa25.82■■□□□ 1.72
FOXA1-204ENST00000554607 CDX4O14627 284 aaPredicted RBP25.81■■□□□ 1.72
FOXA1-204ENST00000554607 ABL1P00519 1130 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 LMAN2Q12907 356 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 FOXC1Q12948 553 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 BYSLQ13895 437 aaKnown RBP25.81■■□□□ 1.72
FOXA1-204ENST00000554607 UNQ6494/PRO21346Q6UXR6 183 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 LPCAT2Q7L5N7 544 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 HS2ST1Q7LGA3 356 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 CBWD2Q8IUF1 395 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 WHAMMQ8TF30 809 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 SLITRK1Q96PX8 696 aa25.81■■□□□ 1.72
FOXA1-204ENST00000554607 LRRC27Q9C0I9 530 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms