RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 RHOBTB1O94844 696 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 CTPS1P17812 591 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SCP2P22307 547 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 RPS6KB1P23443 525 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 CASP4P49662 377 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 NEK2P51955 445 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SUZ12Q15022 739 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 POSTNQ15063 836 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 GPRASP2Q96D09 838 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 POP1Q99575 1024 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 TNFRSF19Q9NS68 423 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 CUL7Q14999 1698 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 PTPRCP08575 1304 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 PRXQ9BXM0 1461 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SLC16A5O15375 505 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 LGR5O75473 907 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 FSBPO95073 299 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 USP14P54578 494 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 DEFA3P59666 94 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 PPP2R5BQ15173 497 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SMTNL2Q2TAL5 461 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SPATC1Q76KD6 591 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 TMC7Q7Z402 723 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 STRA6Q9BX79 667 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 ATXN3LQ9H3M9 355 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 BPIFA1Q9NP55 256 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 PCDHA11Q9Y5I1 949 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 RNF103O00237 685 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 MFN2O95140 757 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 OR6A2O95222 327 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SERPINA3P01011 423 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 KRT4P19013 534 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 DNAJB1P25685 340 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 ALDH1B1P30837 517 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 CTNNB1P35222 781 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 MAP2K5Q13163 448 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 HDAC1Q13547 482 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 KRT74Q7RTS7 529 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 TRMT11Q7Z4G4 463 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 NRDE2Q9H7Z3 1164 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 CUEDC1Q9NWM3 386 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 RHBDL2Q9NX52 303 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 ITGB1BP2Q9UKP3 347 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 MRPS7Q9Y2R9 242 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 VIRMAQ69YN4 1812 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 FAM227AF5H4B4 570 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 UCHL3P15374 230 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 DNASE1L3Q13609 305 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 ARL10Q8N8L6 244 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 PIK3C3Q8NEB9 887 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 FLAD1Q8NFF5 587 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 CCHCR1Q8TD31 782 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 MYEF2Q9P2K5 600 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SNX9Q9Y5X1 595 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF638Q14966 1978 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 PALLDQ8WX93 1383 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 A0A0G2JN53 185 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 GNG14A0A1W2PPG7 69 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 EFCAB8A8MWE9 144 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 C1orf146Q5VVC0 180 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 OTOP2Q7RTS6 562 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 PRUNE1Q86TP1 453 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 OR51B6Q9H340 312 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 HDAC6Q9UBN7 1215 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 ARAP1Q96P48 1450 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 CCL16O15467 120 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 H2AFYO75367 372 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 MLNP12872 115 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 XRCC5P13010 732 aaKnown RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 CHI3L1P36222 383 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SSTP61278 116 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 EPM2AIP1Q7L775 607 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-212ENST00000554584 STX19Q8N4C7 294 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 GPT2Q8TD30 523 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 ART5Q96L15 291 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 SUCNR1Q9BXA5 334 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 KLHL31Q9H511 634 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 VPS45Q9NRW7 570 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 PCDHB8Q9UN66 801 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 FHOD1Q9Y613 1164 aa3.43□□□□□ -1.86
SYNE2-212ENST00000554584 A0A1W2PP64 1363 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 RIMS1Q86UR5 1692 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 DICER1Q9UPY3 1922 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 MYO1CO00159 1063 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TRIM66O15016 1216 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SOAT2O75908 522 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF16P17020 682 aaPredicted RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 IFNA8P32881 189 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TERF2Q15554 542 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NSUN7Q8NE18 718 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 NLGN2Q8NFZ4 835 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 UPF1Q92900 1129 aaKnown RBP eCLIP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 INTS4Q96HW7 963 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 CNOT6LQ96LI5 555 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 ACCSQ96QU6 501 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SH3GL2Q99962 352 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 SEPT3Q9UH03 358 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 FAM32AQ9Y421 112 aaKnown RBP3.42□□□□□ -1.86
SYNE2-212ENST00000554584 TTI1O43156 1089 aa3.42□□□□□ -1.86
SYNE2-212ENST00000554584 GSNP06396 782 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms