RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 NEK10Q6ZWH5 1172 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 TADA2BQ86TJ2 420 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 CCDC170Q8IYT3 715 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 SLC7A5P1Q8MH63 180 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 SYNE4Q8N205 404 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 CNBD1Q8NA66 436 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 ZFAND2BQ8WV99 257 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 MAML1Q92585 1016 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 LPPQ93052 612 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 NKD2Q969F2 451 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 SLC35B4Q969S0 331 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 PPP1R14BQ96C90 147 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 MASTLQ96GX5 879 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 CCDC114Q96M63 670 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 PRRX2Q99811 253 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 OSBPL10Q9BXB5 764 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 GPR87Q9BY21 358 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 SLC12A5Q9H2X9 1139 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 SYNCQ9H7C4 482 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 TMEM165Q9HC07 324 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 IL23AQ9NPF7 189 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 CASS4Q9NQ75 786 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 HDAC6Q9UBN7 1215 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 DDX25Q9UHL0 483 aaKnown RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 ZBTB1Q9Y2K1 713 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 TMED5Q9Y3A6 229 aa4.83□□□□□ -1.64
ATXN3-227ENST00000554491 DDX60Q8IY21 1712 aaKnown RBP4.83□□□□□ -1.64
ATXN3-227ENST00000554491 UNC80Q8N2C7 3258 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 XDHP47989 1333 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 GOLGA6L9A6NEM1 432 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 GOLGA8BA8MQT2 603 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 SMTNL1A8MU46 457 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 H0YGN5 161 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 DVL2O14641 736 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 PRLP01236 227 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 FGAP02671 866 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 RPN1P04843 607 aaKnown RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 GPTP24298 496 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 MCM3P25205 808 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 HNRNPH1P31943 449 aaKnown RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 S100A5P33763 92 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TSPAN7P41732 249 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 RABGGTBP53611 331 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 SESN2P58004 480 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ARPC4P59998 168 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TUBA1BP68363 451 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 SNX1Q13596 522 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 RASA2Q15283 850 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TAF11Q15544 211 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 SH2D4BQ5SQS7 431 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 WLSQ5T9L3 541 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 EMC10Q5UCC4 262 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 EGFLAMQ63HQ2 1017 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TBC1D9BQ66K14 1250 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 LAIR1Q6GTX8 287 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 NAA16Q6N069 864 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 OLFM4Q6UX06 510 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ATF7IPQ6VMQ6 1270 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TUBA1AQ71U36 451 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 CENPQQ7L2Z9 268 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 OTOP1Q7RTM1 612 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 CEP57Q86XR8 500 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 APLFQ8IW19 511 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 GSPT2Q8IYD1 628 aaKnown RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 CEP57L1Q8IYX8 460 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TTC39CQ8N584 583 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 CCDC89Q8N998 374 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 SUN5Q8TC36 379 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ACMSDQ8TDX5 336 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ANKRD49Q8WVL7 239 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 JDP2Q8WYK2 163 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 N4BP2L2Q92802 583 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 GFM2Q969S9 779 aaKnown RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ARMC5Q96C12 935 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 PGBD4Q96DM1 585 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 UROC1Q96N76 676 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 NEK1Q96PY6 1258 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 DEPDC7Q96QD5 511 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 DNAJC7Q99615 494 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 BOCQ9BWV1 1114 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TRIM4Q9C037 500 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 BRINP2Q9C0B6 783 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 VPS33BQ9H267 617 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 MRPL46Q9H2W6 279 aaKnown RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 KIF9Q9HAQ2 790 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 AS3MTQ9HBK9 375 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TCF7L2Q9NQB0 619 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ADARB2Q9NS39 739 aaKnown RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ARGLU1Q9NWB6 273 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-227ENST00000554491 IL20Q9NYY1 176 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 GPRC5DQ9NZD1 345 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 TCEAL9Q9UHQ7 104 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF510Q9Y2H8 683 aa4.82□□□□□ -1.64
ATXN3-227ENST00000554491 ZNF609O15014 1411 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 CDHR2Q9BYE9 1310 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 KLRG2A4D1S0 409 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-227ENST00000554491 GOLGA6L4A6NEF3 574 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 TMEM232C9JQI7 657 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 PRC1O43663 620 aa4.81□□□□□ -1.64
ATXN3-227ENST00000554491 ATP6V1G1O75348 118 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms