RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 TRIM32Q13049 653 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 KYNUQ16719 465 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 DCAF4L1Q3SXM0 396 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 FEZF2Q8TBJ5 459 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 RSRC1Q96IZ7 334 aaKnown RBP15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 HERPUD2Q9BSE4 406 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 HEMGNQ9BXL5 484 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 ELOVL4Q9GZR5 314 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 TUBGCP4Q9UGJ1 667 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 SCINQ9Y6U3 715 aa15.41■□□□□ 0.06
PPP4R3A-201ENST00000554308 CCDC189A1A4V9 331 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 EIF4E1BA6NMX2 242 aaKnown RBP15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 CA12O43570 354 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 ALADP13716 330 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 HSPA6P17066 643 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 VPS41P49754 854 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 TAS2R40P59535 323 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 KRT17Q04695 432 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 CYP1B1Q16678 543 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 PRUNE1Q86TP1 453 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 TRIB2Q92519 343 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 TMEM176AQ96HP8 235 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 STMN4Q9H169 189 aaPredicted RBP15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 SYNCQ9H7C4 482 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 HOMER3Q9NSC5 361 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 KLHL11Q9NVR0 708 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 CYTH4Q9UIA0 394 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 ITGA11Q9UKX5 1188 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 SNX9Q9Y5X1 595 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 TRIP12Q14669 1992 aaPredicted RBP15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 PIK3R2O00459 728 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 CILPO75339 1184 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 RECQL4O94761 1208 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 ECEL1O95672 775 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 LSM8O95777 96 aaKnown RBP15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 P4HA1P13674 534 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 TCF4P15884 667 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 ATICP31939 592 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 PTPN11Q06124 597 aaPredicted RBP15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 FAM47CQ5HY64 1035 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 DNAJC24Q6P3W2 148 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 SPATA21Q7Z572 469 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 SESTD1Q86VW0 696 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 C12orf29Q8N999 325 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 CHST7Q9NS84 486 aa15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
PPP4R3A-201ENST00000554308 MKI67P46013 3256 aaKnown RBP15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 F8VP50 259 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 SUN1O94901 812 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 SLC1A1P43005 524 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 NDST1P52848 882 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 CALCOCO2Q13137 446 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 ATP13A4Q4VNC1 1196 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 UBA3Q8TBC4 463 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 FAM118BQ9BPY3 351 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 KATNAL1Q9BW62 490 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 ASIC3Q9UHC3 531 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 PCDHGC3Q9UN70 934 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 ANK1P16157 1881 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 TRPM7Q96QT4 1865 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 MED7O43513 233 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 DUSP11O75319 330 aaKnown RBP15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 CALB1P05937 261 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 BRAFP15056 766 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 PTPN20Q4JDL3 420 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 BZW1Q7L1Q6 419 aaKnown RBP15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 KCNV2Q8TDN2 545 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 PLVAPQ9BX97 442 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
PPP4R3A-201ENST00000554308 TMEM191CA6NGB0 347 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 GBP1P32455 592 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 TM4SF4P48230 202 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 FCGRTP55899 365 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 PRKCZQ05513 592 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 IRF5Q13568 498 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 CLUL1Q15846 466 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 MAB21L3Q8N8X9 362 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 CKAP2Q8WWK9 683 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 RUNDC3BQ96NL0 473 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 TGS1Q96RS0 853 aaKnown RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 CPXM1Q96SM3 734 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 ZNF518BQ9C0D4 1074 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 GPBP1L1Q9HC44 474 aaPredicted RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 NOP53Q9NZM5 478 aaKnown RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 Q9Y3F1 56 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 LAMA2P24043 3122 aaKnown RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 M0QYV0 167 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 CTSHP09668 335 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 GNAT1P11488 350 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 OGDHQ02218 1023 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 NFX1Q12986 1120 aaKnown RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 NBPF20Q3BBV1 942 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 RHBDF2Q6PJF5 856 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 FAM47EQ6ZV65 393 aa15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 TRMT10CQ7L0Y3 403 aaKnown RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
PPP4R3A-201ENST00000554308 CROCCP2Q86T23 111 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms