RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 CPA6Q8N4T0 437 aa23.34■■□□□ 1.33
RCCD1-202ENST00000554302 CCDC127Q96BQ5 260 aa23.34■■□□□ 1.33
RCCD1-202ENST00000554302 C8orf48Q96LL4 319 aa23.34■■□□□ 1.33
RCCD1-202ENST00000554302 XYLT2Q9H1B5 865 aa23.34■■□□□ 1.33
RCCD1-202ENST00000554302 SLC39A2Q9NP94 309 aa23.34■■□□□ 1.33
RCCD1-202ENST00000554302 DUS2Q9NX74 493 aaKnown RBP23.34■■□□□ 1.33
RCCD1-202ENST00000554302 HDCP19113 662 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 NOP14P78316 857 aaKnown RBP23.33■■□□□ 1.33
RCCD1-202ENST00000554302 ZXDBP98169 803 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 CYP27A1Q02318 531 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 KNOP1Q1ED39 458 aaKnown RBP23.33■■□□□ 1.33
RCCD1-202ENST00000554302 WDR72Q3MJ13 1102 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 FOXD4L6Q3SYB3 417 aaPredicted RBP23.33■■□□□ 1.33
RCCD1-202ENST00000554302 FOXD4L3Q6VB84 417 aaPredicted RBP23.33■■□□□ 1.33
RCCD1-202ENST00000554302 SH3RF2Q8TEC5 729 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 EZH1Q92800 747 aaPredicted RBP23.33■■□□□ 1.33
RCCD1-202ENST00000554302 ATP2A3Q93084 1043 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 P2RY13Q9BPV8 354 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 FAM13BQ9NYF5 915 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 WNT6Q9Y6F9 365 aa23.33■■□□□ 1.33
RCCD1-202ENST00000554302 HELZP42694 1942 aaKnown RBP23.32■■□□□ 1.32
RCCD1-202ENST00000554302 TRIM66O15016 1216 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 RNF40O75150 1001 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 CHRM1P11229 460 aaPredicted RBP23.32■■□□□ 1.32
RCCD1-202ENST00000554302 ME1P48163 572 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 PDE6CP51160 858 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 KCNB1Q14721 858 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 FBXO43Q4G163 708 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 MDH1BQ5I0G3 518 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 NAIF1Q69YI7 327 aaPredicted RBP23.32■■□□□ 1.32
RCCD1-202ENST00000554302 PLEKHO2Q8TD55 490 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 TMEM174Q8WUU8 243 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 SNX25Q9H3E2 840 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 VRTNQ9H8Y1 702 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 SEMA4GQ9NTN9 838 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 EHD2Q9NZN4 543 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 RCOR1Q9UKL0 485 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 NCOR2Q9Y618 2525 aa23.32■■□□□ 1.32
RCCD1-202ENST00000554302 F8VP50 259 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 KLRC4O43908 158 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 OLFM2O95897 454 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 PTPN1P18031 435 aaKnown RBP23.31■■□□□ 1.32
RCCD1-202ENST00000554302 ANXA13P27216 316 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 ATICP31939 592 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 AFMP43652 599 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 IFNAR2P48551 515 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 CLDN10P78369 228 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 PKP1Q13835 747 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 CSRP2Q16527 193 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.31■■□□□ 1.32
RCCD1-202ENST00000554302 CAMKK1Q8N5S9 505 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 FAM160A2Q8N612 972 aaPredicted RBP23.31■■□□□ 1.32
RCCD1-202ENST00000554302 KIAA1958Q8N8K9 716 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 OR6B3Q8NGW1 331 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 EXOC4Q96A65 974 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 RNF25Q96BH1 459 aaPredicted RBP23.31■■□□□ 1.32
RCCD1-202ENST00000554302 RTKNQ9BST9 563 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 DPEP3Q9H4B8 488 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 TMEM30AQ9NV96 361 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 TRPM5Q9NZQ8 1165 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 CDV3Q9UKY7 258 aaKnown RBP23.31■■□□□ 1.32
RCCD1-202ENST00000554302 CFAP45Q9UL16 551 aa23.31■■□□□ 1.32
RCCD1-202ENST00000554302 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.31■■□□□ 1.32
RCCD1-202ENST00000554302 ZNF840PA6NDX5 716 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 PPP3CCP48454 512 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 CACNA2D1P54289 1103 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 MYL6P60660 151 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 TNNC1P63316 161 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 SLC7A9P82251 487 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 HSCBQ8IWL3 235 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 GAB3Q8WWW8 586 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 CD101Q93033 1021 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 LINC00597Q9H2U6 94 aa23.3■■□□□ 1.32
RCCD1-202ENST00000554302 RIOK3O14730 519 aaKnown RBP23.29■■□□□ 1.32
RCCD1-202ENST00000554302 ACTN4O43707 911 aaKnown RBP23.29■■□□□ 1.32
RCCD1-202ENST00000554302 EXOC3O60645 756 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 SLFN14P0C7P3 912 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 CASP4P49662 377 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 DNM1Q05193 864 aaKnown RBP23.29■■□□□ 1.32
RCCD1-202ENST00000554302 STK4Q13043 487 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 TRPC3Q13507 836 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 GRAMD1CQ8IYS0 662 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 GOLGA5Q8TBA6 731 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 PARD3BQ8TEW8 1205 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 SYAP1Q96A49 352 aaPredicted RBP23.29■■□□□ 1.32
RCCD1-202ENST00000554302 ELOVL4Q9GZR5 314 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 DMAC2Q9NW81 257 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 SLC8A2Q9UPR5 921 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 KIAA1549LQ6ZVL6 1849 aa23.29■■□□□ 1.32
RCCD1-202ENST00000554302 PXNP49023 591 aaPredicted RBP23.28■■□□□ 1.32
RCCD1-202ENST00000554302 AP3M2P53677 418 aa23.28■■□□□ 1.32
RCCD1-202ENST00000554302 TDRD10Q5VZ19 366 aaKnown RBP23.28■■□□□ 1.32
RCCD1-202ENST00000554302 PRR23CQ6ZRP0 262 aa23.28■■□□□ 1.32
RCCD1-202ENST00000554302 CEP68Q76N32 757 aa23.28■■□□□ 1.32
RCCD1-202ENST00000554302 SYT13Q7L8C5 426 aa23.28■■□□□ 1.32
RCCD1-202ENST00000554302 SLC9A9Q8IVB4 645 aa23.28■■□□□ 1.32
RCCD1-202ENST00000554302 B3GALNT2Q8NCR0 500 aa23.28■■□□□ 1.32
RCCD1-202ENST00000554302 KIAA0895Q8NCT3 520 aa23.28■■□□□ 1.32
RCCD1-202ENST00000554302 NETO1Q8TDF5 533 aa23.28■■□□□ 1.32
RCCD1-202ENST00000554302 LOXL4Q96JB6 756 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms